gene detail

Gene description

TAIR ID: AT1G48790

Short description: associated molecule with the SH3 domain of STAM 1

Pathogen responsiveness: -2.81

General responsiveness: -3.52

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ubiquitin-dependent protein catabolic process

GO cellular component

cytoplasm, nucleus

GO molecular function

metallopeptidase activity, metal ion binding

Protein domain

Pfam	PF08969, USP8 dimerisation domain
Pfam	PF01398, JAB1/Mov34/MPN/PAD-1 ubiquitin protease
SMART	SM00232, JAB_MPN

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04144: Endocytosis

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.63	7.35E-03