co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G48790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010241: ent-kaurene oxidation to kaurenoic acid	0.00E+00
2	GO:0015833: peptide transport	0.00E+00
3	GO:0046459: short-chain fatty acid metabolic process	0.00E+00
4	GO:0006635: fatty acid beta-oxidation	3.57E-05
5	GO:0046167: glycerol-3-phosphate biosynthetic process	9.14E-05
6	GO:0098710: guanine import across plasma membrane	9.14E-05
7	GO:1990641: response to iron ion starvation	9.14E-05
8	GO:0035344: hypoxanthine transport	9.14E-05
9	GO:1903409: reactive oxygen species biosynthetic process	9.14E-05
10	GO:0098721: uracil import across plasma membrane	9.14E-05
11	GO:0098702: adenine import across plasma membrane	9.14E-05
12	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	2.16E-04
13	GO:0006641: triglyceride metabolic process	2.16E-04
14	GO:0006101: citrate metabolic process	2.16E-04
15	GO:0042939: tripeptide transport	2.16E-04
16	GO:0019441: tryptophan catabolic process to kynurenine	2.16E-04
17	GO:0009308: amine metabolic process	2.16E-04
18	GO:0045836: positive regulation of meiotic nuclear division	3.61E-04
19	GO:0030029: actin filament-based process	3.61E-04
20	GO:0046786: viral replication complex formation and maintenance	3.61E-04
21	GO:0019563: glycerol catabolic process	3.61E-04
22	GO:0090630: activation of GTPase activity	3.61E-04
23	GO:0051259: protein oligomerization	5.20E-04
24	GO:0006624: vacuolar protein processing	5.20E-04
25	GO:0006072: glycerol-3-phosphate metabolic process	5.20E-04
26	GO:0006809: nitric oxide biosynthetic process	5.20E-04
27	GO:0009113: purine nucleobase biosynthetic process	5.20E-04
28	GO:0006882: cellular zinc ion homeostasis	5.20E-04
29	GO:0010222: stem vascular tissue pattern formation	6.90E-04
30	GO:0042594: response to starvation	6.90E-04
31	GO:0010188: response to microbial phytotoxin	6.90E-04
32	GO:0006878: cellular copper ion homeostasis	6.90E-04
33	GO:0042938: dipeptide transport	6.90E-04
34	GO:0045927: positive regulation of growth	8.73E-04
35	GO:0043097: pyrimidine nucleoside salvage	8.73E-04
36	GO:0042732: D-xylose metabolic process	1.07E-03
37	GO:0006206: pyrimidine nucleobase metabolic process	1.07E-03
38	GO:0006694: steroid biosynthetic process	1.27E-03
39	GO:0010044: response to aluminum ion	1.49E-03
40	GO:0009395: phospholipid catabolic process	1.49E-03
41	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.49E-03
42	GO:0071669: plant-type cell wall organization or biogenesis	1.49E-03
43	GO:0009396: folic acid-containing compound biosynthetic process	1.49E-03
44	GO:0006099: tricarboxylic acid cycle	1.67E-03
45	GO:0006102: isocitrate metabolic process	1.72E-03
46	GO:0006605: protein targeting	1.72E-03
47	GO:0006098: pentose-phosphate shunt	2.21E-03
48	GO:0035999: tetrahydrofolate interconversion	2.48E-03
49	GO:0008202: steroid metabolic process	2.48E-03
50	GO:0009641: shade avoidance	2.75E-03
51	GO:0051603: proteolysis involved in cellular protein catabolic process	2.84E-03
52	GO:0002237: response to molecule of bacterial origin	3.93E-03
53	GO:0010167: response to nitrate	4.26E-03
54	GO:0034976: response to endoplasmic reticulum stress	4.58E-03
55	GO:2000377: regulation of reactive oxygen species metabolic process	4.92E-03
56	GO:0009269: response to desiccation	5.62E-03
57	GO:0051321: meiotic cell cycle	5.62E-03
58	GO:0010227: floral organ abscission	6.35E-03
59	GO:0009686: gibberellin biosynthetic process	6.35E-03
60	GO:0010150: leaf senescence	6.70E-03
61	GO:0048443: stamen development	6.73E-03
62	GO:0035556: intracellular signal transduction	7.38E-03
63	GO:0000271: polysaccharide biosynthetic process	7.51E-03
64	GO:0080022: primary root development	7.51E-03
65	GO:0009960: endosperm development	7.91E-03
66	GO:0008360: regulation of cell shape	7.91E-03
67	GO:0010182: sugar mediated signaling pathway	7.91E-03
68	GO:0010468: regulation of gene expression	8.00E-03
69	GO:0009749: response to glucose	8.74E-03
70	GO:0007264: small GTPase mediated signal transduction	9.60E-03
71	GO:0071281: cellular response to iron ion	1.00E-02
72	GO:0006914: autophagy	1.05E-02
73	GO:0010286: heat acclimation	1.09E-02
74	GO:0006970: response to osmotic stress	1.12E-02
75	GO:0007165: signal transduction	1.18E-02
76	GO:0016126: sterol biosynthetic process	1.19E-02
77	GO:0001666: response to hypoxia	1.19E-02
78	GO:0009723: response to ethylene	1.20E-02
79	GO:0080167: response to karrikin	1.29E-02
80	GO:0009817: defense response to fungus, incompatible interaction	1.43E-02
81	GO:0030244: cellulose biosynthetic process	1.43E-02
82	GO:0048767: root hair elongation	1.48E-02
83	GO:0009832: plant-type cell wall biogenesis	1.48E-02
84	GO:0045454: cell redox homeostasis	1.54E-02
85	GO:0006811: ion transport	1.54E-02
86	GO:0006499: N-terminal protein myristoylation	1.54E-02
87	GO:0006865: amino acid transport	1.64E-02
88	GO:0042742: defense response to bacterium	1.69E-02
89	GO:0006869: lipid transport	1.69E-02
90	GO:0048364: root development	1.99E-02
91	GO:0009640: photomorphogenesis	2.03E-02
92	GO:0000165: MAPK cascade	2.32E-02
93	GO:0048367: shoot system development	2.89E-02
94	GO:0009620: response to fungus	3.02E-02
95	GO:0009740: gibberellic acid mediated signaling pathway	3.09E-02
96	GO:0006396: RNA processing	3.29E-02
97	GO:0018105: peptidyl-serine phosphorylation	3.29E-02
98	GO:0009742: brassinosteroid mediated signaling pathway	3.36E-02
99	GO:0009058: biosynthetic process	3.93E-02
100	GO:0009790: embryo development	4.22E-02
101	GO:0006457: protein folding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0009045: xylose isomerase activity	0.00E+00
2	GO:0052616: ent-kaur-16-en-19-ol oxidase activity	0.00E+00
3	GO:0015197: peptide transporter activity	0.00E+00
4	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
5	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
6	GO:0052617: ent-kaur-16-en-19-al oxidase activity	0.00E+00
7	GO:0052615: ent-kaurene oxidase activity	0.00E+00
8	GO:0004370: glycerol kinase activity	0.00E+00
9	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	9.14E-05
10	GO:0001530: lipopolysaccharide binding	9.14E-05
11	GO:0015208: guanine transmembrane transporter activity	9.14E-05
12	GO:0015294: solute:cation symporter activity	9.14E-05
13	GO:0030544: Hsp70 protein binding	9.14E-05
14	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	9.14E-05
15	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	9.14E-05
16	GO:0052595: aliphatic-amine oxidase activity	9.14E-05
17	GO:0015207: adenine transmembrane transporter activity	9.14E-05
18	GO:0019707: protein-cysteine S-acyltransferase activity	9.14E-05
19	GO:0004566: beta-glucuronidase activity	2.16E-04
20	GO:0003994: aconitate hydratase activity	2.16E-04
21	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	2.16E-04
22	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	2.16E-04
23	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	2.16E-04
24	GO:0004061: arylformamidase activity	2.16E-04
25	GO:0004329: formate-tetrahydrofolate ligase activity	2.16E-04
26	GO:0019200: carbohydrate kinase activity	2.16E-04
27	GO:0042937: tripeptide transporter activity	2.16E-04
28	GO:0005047: signal recognition particle binding	3.61E-04
29	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	3.61E-04
30	GO:0004300: enoyl-CoA hydratase activity	5.20E-04
31	GO:0048027: mRNA 5'-UTR binding	5.20E-04
32	GO:0004108: citrate (Si)-synthase activity	5.20E-04
33	GO:0042936: dipeptide transporter activity	6.90E-04
34	GO:0015210: uracil transmembrane transporter activity	6.90E-04
35	GO:0003995: acyl-CoA dehydrogenase activity	6.90E-04
36	GO:0016004: phospholipase activator activity	6.90E-04
37	GO:0004197: cysteine-type endopeptidase activity	7.39E-04
38	GO:0003997: acyl-CoA oxidase activity	8.73E-04
39	GO:0070300: phosphatidic acid binding	1.27E-03
40	GO:0051753: mannan synthase activity	1.27E-03
41	GO:0004849: uridine kinase activity	1.27E-03
42	GO:0004525: ribonuclease III activity	1.72E-03
43	GO:0008142: oxysterol binding	1.96E-03
44	GO:0000989: transcription factor activity, transcription factor binding	2.21E-03
45	GO:0005507: copper ion binding	2.28E-03
46	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.48E-03
47	GO:0047617: acyl-CoA hydrolase activity	2.48E-03
48	GO:0000976: transcription regulatory region sequence-specific DNA binding	3.32E-03
49	GO:0019888: protein phosphatase regulator activity	3.63E-03
50	GO:0008081: phosphoric diester hydrolase activity	3.63E-03
51	GO:0004175: endopeptidase activity	3.93E-03
52	GO:0008131: primary amine oxidase activity	3.93E-03
53	GO:0005215: transporter activity	4.53E-03
54	GO:0019706: protein-cysteine S-palmitoyltransferase activity	5.62E-03
55	GO:0004707: MAP kinase activity	5.62E-03
56	GO:0016760: cellulose synthase (UDP-forming) activity	6.35E-03
57	GO:0003756: protein disulfide isomerase activity	6.73E-03
58	GO:0016301: kinase activity	6.87E-03
59	GO:0048038: quinone binding	9.16E-03
60	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.00E-02
61	GO:0016759: cellulose synthase activity	1.05E-02
62	GO:0016788: hydrolase activity, acting on ester bonds	1.06E-02
63	GO:0005200: structural constituent of cytoskeleton	1.09E-02
64	GO:0005096: GTPase activator activity	1.48E-02
65	GO:0005524: ATP binding	1.53E-02
66	GO:0050897: cobalt ion binding	1.59E-02
67	GO:0003993: acid phosphatase activity	1.75E-02
68	GO:0051539: 4 iron, 4 sulfur cluster binding	1.86E-02
69	GO:0035091: phosphatidylinositol binding	2.14E-02
70	GO:0008289: lipid binding	2.65E-02
71	GO:0015171: amino acid transmembrane transporter activity	2.70E-02
72	GO:0008234: cysteine-type peptidase activity	2.70E-02
73	GO:0022857: transmembrane transporter activity	3.09E-02
74	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.85E-02
75	GO:0004252: serine-type endopeptidase activity	4.07E-02
76	GO:0004674: protein serine/threonine kinase activity	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0000323: lytic vacuole	4.05E-06
3	GO:0005773: vacuole	1.09E-04
4	GO:0016021: integral component of membrane	2.35E-04
5	GO:0005886: plasma membrane	4.90E-04
6	GO:0005774: vacuolar membrane	5.94E-04
7	GO:0030173: integral component of Golgi membrane	1.27E-03
8	GO:0005777: peroxisome	1.64E-03
9	GO:0009514: glyoxysome	1.96E-03
10	GO:0034045: pre-autophagosomal structure membrane	1.96E-03
11	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.96E-03
12	GO:0005802: trans-Golgi network	2.72E-03
13	GO:0000159: protein phosphatase type 2A complex	3.03E-03
14	GO:0005765: lysosomal membrane	3.03E-03
15	GO:0005768: endosome	3.31E-03
16	GO:0005764: lysosome	3.93E-03
17	GO:0005615: extracellular space	7.49E-03
18	GO:0005794: Golgi apparatus	8.00E-03
19	GO:0005783: endoplasmic reticulum	8.50E-03
20	GO:0009707: chloroplast outer membrane	1.43E-02
21	GO:0000325: plant-type vacuole	1.59E-02
22	GO:0000786: nucleosome	1.64E-02
23	GO:0010008: endosome membrane	2.89E-02
24	GO:0005737: cytoplasm	3.74E-02
25	GO:0009705: plant-type vacuole membrane	4.75E-02