gene detail

Gene description

TAIR ID: AT1G48630

Short description: receptor for activated C kinase 1B

Pathogen responsiveness: -1.73

General responsiveness: -0.39

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ribosome biogenesis, positive regulation of signal transduction, signal transduction, cellular response to abscisic acid stimulus, regulation of translation, root development, seed germination, shoot system development

GO cellular component

cytosolic ribosome, nucleus, cytosol, cytoplasm

GO molecular function

MAP-kinase scaffold activity, signal transducer activity

Protein domain

Pfam	PF00400, WD domain, G-beta repeat
SMART	SM00320, WD40

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.57	5.18E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.91	3.68E-05