Gene: AT1G47270
     

Gene description


TAIR ID: AT1G47270

Short description: tubby like protein 6

Pathogen responsiveness: -1.34

General responsiveness: -2.28

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, pollen development


GO cellular component


nucleus


GO molecular function


phosphoric diester hydrolase activity, transcription factor activity, sequence-specific DNA binding, phosphatidylinositol binding


Protein domain


PfamPF00646, F-box domain
PfamPF01167, Tub family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770, AT4G36990

Target:
AT2G30490

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.682.82E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.195.95E-13
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.523.60E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.194.90E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.683.44E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.532.52E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.101.48E-03






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