gene detail

Gene description

TAIR ID: AT1G45010

Short description: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

unkown

GO molecular function

molecular_function

Protein domain

Pfam	PF03798, TLC domain
SMART	SM00724, TLC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.86	7.41E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-3.42	3.10E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.24	8.74E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-3.30	4.36E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.85	4.87E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.32	1.19E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.65	1.27E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.66	1.82E-08