gene detail

Gene description

TAIR ID: AT1G34420

Short description: leucine-rich repeat transmembrane protein kinase family protein

Pathogen responsiveness: 0.91

General responsiveness: -1.17

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G059214

Wheat: No orthologous gene

GO biological process

protein phosphorylation

GO cellular component

integral component of membrane, plasma membrane

GO molecular function

protein kinase activity, ATP binding

Protein domain

Pfam	PF00560, Leucine Rich Repeat
Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF13855, Leucine rich repeat
Pfam	PF07714, Protein tyrosine kinase
SMART	SM00369, LRR_TYP
SMART	SM00364, LRR_BAC
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G62300, AT4G31550, AT4G31800

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

36 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.66	1.48E-07
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	1.63	6.63E-09
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.78	1.28E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.10	1.55E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.83	8.75E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.82	1.05E-08
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	1.64	3.13E-09
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	1.51	1.17E-08
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.54	9.48E-06
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	2.05	6.03E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	1.97	6.35E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.81	1.30E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.37	1.06E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.52	6.91E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.20	6.36E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.74	1.29E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.52	1.15E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.85	1.32E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	3.72	1.39E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.81	1.02E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	3.75	1.09E-15
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.66	1.01E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.74	1.17E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	4.64	1.35E-14
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.44	3.56E-12
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.54	1.08E-10
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.53	9.58E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.80	4.26E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	1.67	3.71E-02
GSE5520	Col, WT, control 24 h	Col, WT, PsDC3118 Cor- 24 h	1.55	3.71E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.44	5.59E-04
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.78	2.40E-10
GSE5685	Col, WT, control 24 h	Col, WT, Ps ES4326 24 h	1.85	5.66E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.68	1.24E-02
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.93	8.51E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.91	1.05E-04