Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G34420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
2GO:1900067: regulation of cellular response to alkaline pH0.00E+00
3GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
4GO:0002376: immune system process0.00E+00
5GO:0010273: detoxification of copper ion0.00E+00
6GO:0015690: aluminum cation transport0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:0033587: shikimate biosynthetic process0.00E+00
10GO:0046865: terpenoid transport0.00E+00
11GO:0010324: membrane invagination0.00E+00
12GO:0071327: cellular response to trehalose stimulus0.00E+00
13GO:0010055: atrichoblast differentiation0.00E+00
14GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
15GO:1902001: fatty acid transmembrane transport0.00E+00
16GO:0060548: negative regulation of cell death6.63E-09
17GO:0009611: response to wounding9.42E-08
18GO:0006979: response to oxidative stress1.05E-07
19GO:0006952: defense response1.59E-07
20GO:0009753: response to jasmonic acid4.40E-07
21GO:0010112: regulation of systemic acquired resistance1.21E-06
22GO:0010200: response to chitin5.18E-06
23GO:0019725: cellular homeostasis1.08E-05
24GO:0009751: response to salicylic acid1.93E-05
25GO:2000022: regulation of jasmonic acid mediated signaling pathway3.43E-05
26GO:0071456: cellular response to hypoxia3.43E-05
27GO:0010186: positive regulation of cellular defense response3.66E-05
28GO:0006098: pentose-phosphate shunt5.22E-05
29GO:0051707: response to other organism1.07E-04
30GO:1903507: negative regulation of nucleic acid-templated transcription1.10E-04
31GO:0010193: response to ozone1.13E-04
32GO:0033358: UDP-L-arabinose biosynthetic process1.36E-04
33GO:0045227: capsule polysaccharide biosynthetic process1.36E-04
34GO:0009737: response to abscisic acid1.40E-04
35GO:0010150: leaf senescence2.17E-04
36GO:0009643: photosynthetic acclimation2.95E-04
37GO:0031348: negative regulation of defense response4.54E-04
38GO:0019567: arabinose biosynthetic process4.95E-04
39GO:0080173: male-female gamete recognition during double fertilization4.95E-04
40GO:1901183: positive regulation of camalexin biosynthetic process4.95E-04
41GO:0009270: response to humidity4.95E-04
42GO:0033306: phytol metabolic process4.95E-04
43GO:0009700: indole phytoalexin biosynthetic process4.95E-04
44GO:0034214: protein hexamerization4.95E-04
45GO:1990542: mitochondrial transmembrane transport4.95E-04
46GO:0032107: regulation of response to nutrient levels4.95E-04
47GO:0048508: embryonic meristem development4.95E-04
48GO:0015760: glucose-6-phosphate transport4.95E-04
49GO:0046256: 2,4,6-trinitrotoluene catabolic process4.95E-04
50GO:1900056: negative regulation of leaf senescence5.07E-04
51GO:0009625: response to insect5.09E-04
52GO:0006012: galactose metabolic process5.09E-04
53GO:0006468: protein phosphorylation5.14E-04
54GO:0030091: protein repair6.32E-04
55GO:0042391: regulation of membrane potential6.95E-04
56GO:0010120: camalexin biosynthetic process7.70E-04
57GO:2000031: regulation of salicylic acid mediated signaling pathway7.70E-04
58GO:0009646: response to absence of light8.38E-04
59GO:0031347: regulation of defense response9.82E-04
60GO:0042742: defense response to bacterium1.02E-03
61GO:0019521: D-gluconate metabolic process1.07E-03
62GO:0010115: regulation of abscisic acid biosynthetic process1.07E-03
63GO:0015865: purine nucleotide transport1.07E-03
64GO:0010271: regulation of chlorophyll catabolic process1.07E-03
65GO:0015908: fatty acid transport1.07E-03
66GO:0044419: interspecies interaction between organisms1.07E-03
67GO:0009945: radial axis specification1.07E-03
68GO:0015712: hexose phosphate transport1.07E-03
69GO:0071668: plant-type cell wall assembly1.07E-03
70GO:0019441: tryptophan catabolic process to kynurenine1.07E-03
71GO:0009446: putrescine biosynthetic process1.07E-03
72GO:0051258: protein polymerization1.07E-03
73GO:0015914: phospholipid transport1.07E-03
74GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.07E-03
75GO:0009838: abscission1.07E-03
76GO:0015802: basic amino acid transport1.07E-03
77GO:0010618: aerenchyma formation1.07E-03
78GO:0006527: arginine catabolic process1.07E-03
79GO:0080181: lateral root branching1.07E-03
80GO:0055088: lipid homeostasis1.07E-03
81GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.08E-03
82GO:0050832: defense response to fungus1.20E-03
83GO:0007166: cell surface receptor signaling pathway1.32E-03
84GO:0009626: plant-type hypersensitive response1.64E-03
85GO:0002213: defense response to insect1.67E-03
86GO:0015714: phosphoenolpyruvate transport1.74E-03
87GO:0080168: abscisic acid transport1.74E-03
88GO:1900055: regulation of leaf senescence1.74E-03
89GO:0015695: organic cation transport1.74E-03
90GO:0006954: inflammatory response1.74E-03
91GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.74E-03
92GO:0034051: negative regulation of plant-type hypersensitive response1.74E-03
93GO:1900140: regulation of seedling development1.74E-03
94GO:0010498: proteasomal protein catabolic process1.74E-03
95GO:0035436: triose phosphate transmembrane transport1.74E-03
96GO:0045793: positive regulation of cell size1.74E-03
97GO:0015692: lead ion transport1.74E-03
98GO:0009266: response to temperature stimulus2.14E-03
99GO:0009225: nucleotide-sugar metabolic process2.40E-03
100GO:0046902: regulation of mitochondrial membrane permeability2.52E-03
101GO:0010731: protein glutathionylation2.52E-03
102GO:0015696: ammonium transport2.52E-03
103GO:0051289: protein homotetramerization2.52E-03
104GO:0001676: long-chain fatty acid metabolic process2.52E-03
105GO:0046836: glycolipid transport2.52E-03
106GO:0010116: positive regulation of abscisic acid biosynthetic process2.52E-03
107GO:0048194: Golgi vesicle budding2.52E-03
108GO:0009407: toxin catabolic process2.53E-03
109GO:0048527: lateral root development2.69E-03
110GO:0009414: response to water deprivation2.79E-03
111GO:2000377: regulation of reactive oxygen species metabolic process2.97E-03
112GO:0009867: jasmonic acid mediated signaling pathway3.02E-03
113GO:0009695: jasmonic acid biosynthetic process3.28E-03
114GO:0080167: response to karrikin3.29E-03
115GO:0010107: potassium ion import3.40E-03
116GO:0072488: ammonium transmembrane transport3.40E-03
117GO:0080142: regulation of salicylic acid biosynthetic process3.40E-03
118GO:0015713: phosphoglycerate transport3.40E-03
119GO:0008295: spermidine biosynthetic process3.40E-03
120GO:0009694: jasmonic acid metabolic process3.40E-03
121GO:0034440: lipid oxidation3.40E-03
122GO:1901141: regulation of lignin biosynthetic process3.40E-03
123GO:0010109: regulation of photosynthesis3.40E-03
124GO:0010483: pollen tube reception3.40E-03
125GO:0048638: regulation of developmental growth3.40E-03
126GO:0009652: thigmotropism3.40E-03
127GO:0009697: salicylic acid biosynthetic process4.36E-03
128GO:0034052: positive regulation of plant-type hypersensitive response4.36E-03
129GO:0009164: nucleoside catabolic process4.36E-03
130GO:0010225: response to UV-C4.36E-03
131GO:0009636: response to toxic substance4.85E-03
132GO:0033365: protein localization to organelle5.40E-03
133GO:0006596: polyamine biosynthetic process5.40E-03
134GO:0009117: nucleotide metabolic process5.40E-03
135GO:0006574: valine catabolic process5.40E-03
136GO:0018258: protein O-linked glycosylation via hydroxyproline5.40E-03
137GO:0009759: indole glucosinolate biosynthetic process5.40E-03
138GO:0010942: positive regulation of cell death5.40E-03
139GO:0010405: arabinogalactan protein metabolic process5.40E-03
140GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.40E-03
141GO:0009617: response to bacterium5.99E-03
142GO:0009809: lignin biosynthetic process6.12E-03
143GO:0006486: protein glycosylation6.12E-03
144GO:0042372: phylloquinone biosynthetic process6.52E-03
145GO:0045926: negative regulation of growth6.52E-03
146GO:0009612: response to mechanical stimulus6.52E-03
147GO:0009942: longitudinal axis specification6.52E-03
148GO:0009094: L-phenylalanine biosynthetic process6.52E-03
149GO:0080086: stamen filament development6.52E-03
150GO:0010310: regulation of hydrogen peroxide metabolic process6.52E-03
151GO:1900057: positive regulation of leaf senescence7.71E-03
152GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.71E-03
153GO:0050829: defense response to Gram-negative bacterium7.71E-03
154GO:1902074: response to salt7.71E-03
155GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.71E-03
156GO:0043090: amino acid import7.71E-03
157GO:0071446: cellular response to salicylic acid stimulus7.71E-03
158GO:0009620: response to fungus8.56E-03
159GO:0043068: positive regulation of programmed cell death8.97E-03
160GO:0009787: regulation of abscisic acid-activated signaling pathway8.97E-03
161GO:0009819: drought recovery8.97E-03
162GO:0009624: response to nematode9.62E-03
163GO:0009651: response to salt stress9.68E-03
164GO:0006970: response to osmotic stress9.97E-03
165GO:0010204: defense response signaling pathway, resistance gene-independent1.03E-02
166GO:0030968: endoplasmic reticulum unfolded protein response1.03E-02
167GO:0010208: pollen wall assembly1.03E-02
168GO:0009699: phenylpropanoid biosynthetic process1.03E-02
169GO:0009723: response to ethylene1.11E-02
170GO:0046916: cellular transition metal ion homeostasis1.17E-02
171GO:0019432: triglyceride biosynthetic process1.17E-02
172GO:0009056: catabolic process1.17E-02
173GO:0009835: fruit ripening1.17E-02
174GO:0009627: systemic acquired resistance1.19E-02
175GO:0090332: stomatal closure1.32E-02
176GO:0048268: clathrin coat assembly1.32E-02
177GO:0048354: mucilage biosynthetic process involved in seed coat development1.32E-02
178GO:0010380: regulation of chlorophyll biosynthetic process1.32E-02
179GO:0008202: steroid metabolic process1.32E-02
180GO:1900426: positive regulation of defense response to bacterium1.32E-02
181GO:0009638: phototropism1.32E-02
182GO:0009870: defense response signaling pathway, resistance gene-dependent1.47E-02
183GO:0006032: chitin catabolic process1.47E-02
184GO:0019538: protein metabolic process1.47E-02
185GO:0010311: lateral root formation1.47E-02
186GO:0043069: negative regulation of programmed cell death1.47E-02
187GO:0009409: response to cold1.58E-02
188GO:0010119: regulation of stomatal movement1.62E-02
189GO:0072593: reactive oxygen species metabolic process1.63E-02
190GO:0048229: gametophyte development1.63E-02
191GO:0009684: indoleacetic acid biosynthetic process1.63E-02
192GO:0007165: signal transduction1.64E-02
193GO:0012501: programmed cell death1.80E-02
194GO:0010105: negative regulation of ethylene-activated signaling pathway1.80E-02
195GO:0000266: mitochondrial fission1.80E-02
196GO:0009785: blue light signaling pathway1.97E-02
197GO:0055046: microgametogenesis1.97E-02
198GO:0006897: endocytosis2.11E-02
199GO:0034605: cellular response to heat2.14E-02
200GO:0006470: protein dephosphorylation2.29E-02
201GO:0042343: indole glucosinolate metabolic process2.33E-02
202GO:0046688: response to copper ion2.33E-02
203GO:0009901: anther dehiscence2.33E-02
204GO:0000162: tryptophan biosynthetic process2.51E-02
205GO:0006855: drug transmembrane transport2.68E-02
206GO:0006874: cellular calcium ion homeostasis2.90E-02
207GO:0006825: copper ion transport2.90E-02
208GO:0031408: oxylipin biosynthetic process3.11E-02
209GO:0003333: amino acid transmembrane transport3.11E-02
210GO:0016998: cell wall macromolecule catabolic process3.11E-02
211GO:0098542: defense response to other organism3.11E-02
212GO:0009693: ethylene biosynthetic process3.53E-02
213GO:0040007: growth3.53E-02
214GO:0019722: calcium-mediated signaling3.74E-02
215GO:0009561: megagametogenesis3.74E-02
216GO:0016567: protein ubiquitination3.78E-02
217GO:0070417: cellular response to cold3.96E-02
218GO:0042631: cellular response to water deprivation4.19E-02
219GO:0000271: polysaccharide biosynthetic process4.19E-02
220GO:0000413: protein peptidyl-prolyl isomerization4.19E-02
221GO:0010118: stomatal movement4.19E-02
222GO:0048653: anther development4.19E-02
223GO:0006520: cellular amino acid metabolic process4.42E-02
224GO:0045489: pectin biosynthetic process4.42E-02
225GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.53E-02
226GO:0009738: abscisic acid-activated signaling pathway4.87E-02
227GO:0006623: protein targeting to vacuole4.88E-02
228GO:0009749: response to glucose4.88E-02
229GO:0008654: phospholipid biosynthetic process4.88E-02
RankGO TermAdjusted P value
1GO:0080131: hydroxyjasmonate sulfotransferase activity0.00E+00
2GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
3GO:0004168: dolichol kinase activity0.00E+00
4GO:0003978: UDP-glucose 4-epimerase activity1.17E-05
5GO:0050373: UDP-arabinose 4-epimerase activity1.36E-04
6GO:0016301: kinase activity1.53E-04
7GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.64E-04
8GO:0030552: cAMP binding2.31E-04
9GO:0030553: cGMP binding2.31E-04
10GO:0005509: calcium ion binding2.65E-04
11GO:0003714: transcription corepressor activity3.10E-04
12GO:0005216: ion channel activity3.55E-04
13GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.95E-04
14GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.95E-04
15GO:0004012: phospholipid-translocating ATPase activity3.95E-04
16GO:0019707: protein-cysteine S-acyltransferase activity4.95E-04
17GO:2001147: camalexin binding4.95E-04
18GO:0008792: arginine decarboxylase activity4.95E-04
19GO:0015245: fatty acid transporter activity4.95E-04
20GO:2001227: quercitrin binding4.95E-04
21GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.95E-04
22GO:0043295: glutathione binding5.07E-04
23GO:0005544: calcium-dependent phospholipid binding6.32E-04
24GO:0004714: transmembrane receptor protein tyrosine kinase activity6.32E-04
25GO:0030551: cyclic nucleotide binding6.95E-04
26GO:0005249: voltage-gated potassium channel activity6.95E-04
27GO:0019901: protein kinase binding9.15E-04
28GO:0015152: glucose-6-phosphate transmembrane transporter activity1.07E-03
29GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.07E-03
30GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.07E-03
31GO:0004061: arylformamidase activity1.07E-03
32GO:0004385: guanylate kinase activity1.07E-03
33GO:0048531: beta-1,3-galactosyltransferase activity1.07E-03
34GO:0047364: desulfoglucosinolate sulfotransferase activity1.07E-03
35GO:0004568: chitinase activity1.26E-03
36GO:0008171: O-methyltransferase activity1.26E-03
37GO:0042409: caffeoyl-CoA O-methyltransferase activity1.74E-03
38GO:0016165: linoleate 13S-lipoxygenase activity1.74E-03
39GO:0071917: triose-phosphate transmembrane transporter activity1.74E-03
40GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.74E-03
41GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.74E-03
42GO:0008146: sulfotransferase activity2.40E-03
43GO:0017077: oxidative phosphorylation uncoupler activity2.52E-03
44GO:0017089: glycolipid transporter activity2.52E-03
45GO:0004674: protein serine/threonine kinase activity2.54E-03
46GO:0050660: flavin adenine dinucleotide binding2.91E-03
47GO:0001046: core promoter sequence-specific DNA binding2.97E-03
48GO:0005524: ATP binding3.38E-03
49GO:0003995: acyl-CoA dehydrogenase activity3.40E-03
50GO:0009916: alternative oxidase activity3.40E-03
51GO:0015120: phosphoglycerate transmembrane transporter activity3.40E-03
52GO:0047769: arogenate dehydratase activity3.40E-03
53GO:0004834: tryptophan synthase activity3.40E-03
54GO:0004737: pyruvate decarboxylase activity3.40E-03
55GO:0004664: prephenate dehydratase activity3.40E-03
56GO:0051861: glycolipid binding3.40E-03
57GO:0033612: receptor serine/threonine kinase binding3.61E-03
58GO:0004364: glutathione transferase activity3.97E-03
59GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.11E-03
60GO:0003997: acyl-CoA oxidase activity4.36E-03
61GO:0005496: steroid binding4.36E-03
62GO:0047631: ADP-ribose diphosphatase activity4.36E-03
63GO:0005471: ATP:ADP antiporter activity4.36E-03
64GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.36E-03
65GO:0004499: N,N-dimethylaniline monooxygenase activity4.70E-03
66GO:0015293: symporter activity4.85E-03
67GO:0000210: NAD+ diphosphatase activity5.40E-03
68GO:0008519: ammonium transmembrane transporter activity5.40E-03
69GO:0030976: thiamine pyrophosphate binding5.40E-03
70GO:0004605: phosphatidate cytidylyltransferase activity5.40E-03
71GO:1990714: hydroxyproline O-galactosyltransferase activity5.40E-03
72GO:0043565: sequence-specific DNA binding6.37E-03
73GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides6.52E-03
74GO:0004144: diacylglycerol O-acyltransferase activity6.52E-03
75GO:0003950: NAD+ ADP-ribosyltransferase activity6.52E-03
76GO:0005261: cation channel activity6.52E-03
77GO:0019900: kinase binding6.52E-03
78GO:0008113: peptide-methionine (S)-S-oxide reductase activity6.52E-03
79GO:0016831: carboxy-lyase activity7.71E-03
80GO:0004033: aldo-keto reductase (NADP) activity8.97E-03
81GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity8.97E-03
82GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.48E-03
83GO:0008271: secondary active sulfate transmembrane transporter activity1.03E-02
84GO:0008142: oxysterol binding1.03E-02
85GO:0016207: 4-coumarate-CoA ligase activity1.17E-02
86GO:0071949: FAD binding1.17E-02
87GO:0004497: monooxygenase activity1.23E-02
88GO:0016758: transferase activity, transferring hexosyl groups1.24E-02
89GO:0004721: phosphoprotein phosphatase activity1.26E-02
90GO:0004806: triglyceride lipase activity1.26E-02
91GO:0030247: polysaccharide binding1.26E-02
92GO:0047617: acyl-CoA hydrolase activity1.32E-02
93GO:0005545: 1-phosphatidylinositol binding1.47E-02
94GO:0015020: glucuronosyltransferase activity1.47E-02
95GO:0005515: protein binding1.59E-02
96GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.62E-02
97GO:0004842: ubiquitin-protein transferase activity1.65E-02
98GO:0015116: sulfate transmembrane transporter activity1.80E-02
99GO:0008378: galactosyltransferase activity1.80E-02
100GO:0004722: protein serine/threonine phosphatase activity1.86E-02
101GO:0004672: protein kinase activity1.87E-02
102GO:0005388: calcium-transporting ATPase activity1.97E-02
103GO:0005315: inorganic phosphate transmembrane transporter activity1.97E-02
104GO:0050661: NADP binding2.02E-02
105GO:0004970: ionotropic glutamate receptor activity2.33E-02
106GO:0005217: intracellular ligand-gated ion channel activity2.33E-02
107GO:0004190: aspartic-type endopeptidase activity2.33E-02
108GO:0003954: NADH dehydrogenase activity2.71E-02
109GO:0004707: MAP kinase activity3.11E-02
110GO:0019706: protein-cysteine S-palmitoyltransferase activity3.11E-02
111GO:0005507: copper ion binding3.20E-02
112GO:0016298: lipase activity3.20E-02
113GO:0000287: magnesium ion binding3.26E-02
114GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.31E-02
115GO:0015171: amino acid transmembrane transporter activity3.42E-02
116GO:0005516: calmodulin binding3.51E-02
117GO:0043531: ADP binding3.74E-02
118GO:0005199: structural constituent of cell wall4.42E-02
119GO:0030276: clathrin binding4.42E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005886: plasma membrane8.66E-09
3GO:0016021: integral component of membrane5.58E-06
4GO:0005901: caveola1.08E-05
5GO:0000138: Golgi trans cisterna4.95E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane1.07E-03
7GO:0008287: protein serine/threonine phosphatase complex1.74E-03
8GO:0009530: primary cell wall1.74E-03
9GO:0070062: extracellular exosome2.52E-03
10GO:0005887: integral component of plasma membrane3.37E-03
11GO:0032586: protein storage vacuole membrane3.40E-03
12GO:0016363: nuclear matrix6.52E-03
13GO:0005777: peroxisome7.50E-03
14GO:0032580: Golgi cisterna membrane8.92E-03
15GO:0000326: protein storage vacuole1.03E-02
16GO:0005740: mitochondrial envelope1.47E-02
17GO:0031012: extracellular matrix1.97E-02
18GO:0005743: mitochondrial inner membrane1.99E-02
19GO:0005794: Golgi apparatus2.29E-02
20GO:0030176: integral component of endoplasmic reticulum membrane2.33E-02
21GO:0005769: early endosome2.51E-02
22GO:0009506: plasmodesma2.86E-02
23GO:0070469: respiratory chain2.90E-02
24GO:0005741: mitochondrial outer membrane3.11E-02
25GO:0005905: clathrin-coated pit3.11E-02
26GO:0030136: clathrin-coated vesicle3.96E-02
27GO:0031965: nuclear membrane4.88E-02
<
Gene type



Gene DE type