Gene: AT1G33390
     

Gene description


TAIR ID: AT1G33390

Short description: RNA helicase family protein

Pathogen responsiveness: -1.41

General responsiveness: -2.65

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G357923  

Wheat: No orthologous gene

GO biological process


RNA processing


GO cellular component


nucleus, cytoplasm


GO molecular function


ATP binding, RNA binding, ATP-dependent RNA helicase activity, helicase activity


Protein domain


PfamPF04408, Helicase associated domain (HA2)
PfamPF00271, Helicase conserved C-terminal domain
PfamPF07717, Oligonucleotide/oligosaccharide-binding (OB)-fold
SMARTSM00487, DEXDc
SMARTSM00847, HA2
SMARTSM00490, HELICc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G53660, AT5G41315

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.523.26E-02
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.763.86E-02
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.512.70E-06






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.