co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G33390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0080053: response to phenylalanine	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
5	GO:0006497: protein lipidation	0.00E+00
6	GO:0006182: cGMP biosynthetic process	0.00E+00
7	GO:0043201: response to leucine	0.00E+00
8	GO:0080052: response to histidine	0.00E+00
9	GO:0007141: male meiosis I	0.00E+00
10	GO:0006499: N-terminal protein myristoylation	3.81E-05
11	GO:0006468: protein phosphorylation	1.00E-04
12	GO:0002143: tRNA wobble position uridine thiolation	2.00E-04
13	GO:0042759: long-chain fatty acid biosynthetic process	2.00E-04
14	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.00E-04
15	GO:0006422: aspartyl-tRNA aminoacylation	2.00E-04
16	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	2.00E-04
17	GO:0009620: response to fungus	2.17E-04
18	GO:0009821: alkaloid biosynthetic process	2.49E-04
19	GO:0043066: negative regulation of apoptotic process	4.48E-04
20	GO:0019483: beta-alanine biosynthetic process	4.48E-04
21	GO:0042939: tripeptide transport	4.48E-04
22	GO:1902000: homogentisate catabolic process	4.48E-04
23	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.48E-04
24	GO:0008535: respiratory chain complex IV assembly	4.48E-04
25	GO:0006212: uracil catabolic process	4.48E-04
26	GO:0019374: galactolipid metabolic process	4.48E-04
27	GO:0010150: leaf senescence	6.00E-04
28	GO:0009751: response to salicylic acid	6.02E-04
29	GO:0010053: root epidermal cell differentiation	6.61E-04
30	GO:1900055: regulation of leaf senescence	7.29E-04
31	GO:0042780: tRNA 3'-end processing	7.29E-04
32	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	7.29E-04
33	GO:0009072: aromatic amino acid family metabolic process	7.29E-04
34	GO:0010498: proteasomal protein catabolic process	7.29E-04
35	GO:2000377: regulation of reactive oxygen species metabolic process	8.13E-04
36	GO:0000027: ribosomal large subunit assembly	8.13E-04
37	GO:0046513: ceramide biosynthetic process	1.04E-03
38	GO:0000187: activation of MAPK activity	1.04E-03
39	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.04E-03
40	GO:0048194: Golgi vesicle budding	1.04E-03
41	GO:0010227: floral organ abscission	1.16E-03
42	GO:0000460: maturation of 5.8S rRNA	1.38E-03
43	GO:2000038: regulation of stomatal complex development	1.38E-03
44	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.38E-03
45	GO:0042938: dipeptide transport	1.38E-03
46	GO:0033320: UDP-D-xylose biosynthetic process	1.38E-03
47	GO:0042742: defense response to bacterium	1.60E-03
48	GO:0005513: detection of calcium ion	1.76E-03
49	GO:0018344: protein geranylgeranylation	1.76E-03
50	GO:0007264: small GTPase mediated signal transduction	2.08E-03
51	GO:1900425: negative regulation of defense response to bacterium	2.17E-03
52	GO:0002238: response to molecule of fungal origin	2.17E-03
53	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.17E-03
54	GO:0048232: male gamete generation	2.17E-03
55	GO:0000470: maturation of LSU-rRNA	2.17E-03
56	GO:0042732: D-xylose metabolic process	2.17E-03
57	GO:0006310: DNA recombination	2.35E-03
58	GO:0006952: defense response	2.55E-03
59	GO:0009612: response to mechanical stimulus	2.60E-03
60	GO:2000037: regulation of stomatal complex patterning	2.60E-03
61	GO:0009615: response to virus	2.80E-03
62	GO:1902074: response to salt	3.06E-03
63	GO:0043090: amino acid import	3.06E-03
64	GO:1900150: regulation of defense response to fungus	3.55E-03
65	GO:0009850: auxin metabolic process	3.55E-03
66	GO:0006644: phospholipid metabolic process	3.55E-03
67	GO:0009819: drought recovery	3.55E-03
68	GO:0009407: toxin catabolic process	4.02E-03
69	GO:0043562: cellular response to nitrogen levels	4.06E-03
70	GO:0006303: double-strand break repair via nonhomologous end joining	4.06E-03
71	GO:0006002: fructose 6-phosphate metabolic process	4.06E-03
72	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.06E-03
73	GO:0007338: single fertilization	4.60E-03
74	GO:0046685: response to arsenic-containing substance	4.60E-03
75	GO:0008202: steroid metabolic process	5.15E-03
76	GO:0000723: telomere maintenance	5.15E-03
77	GO:0043069: negative regulation of programmed cell death	5.74E-03
78	GO:0051026: chiasma assembly	5.74E-03
79	GO:0019684: photosynthesis, light reaction	6.34E-03
80	GO:0030148: sphingolipid biosynthetic process	6.34E-03
81	GO:0000038: very long-chain fatty acid metabolic process	6.34E-03
82	GO:0010582: floral meristem determinacy	6.96E-03
83	GO:0006807: nitrogen compound metabolic process	7.61E-03
84	GO:0010229: inflorescence development	7.61E-03
85	GO:0055046: microgametogenesis	7.61E-03
86	GO:0010102: lateral root morphogenesis	7.61E-03
87	GO:0009809: lignin biosynthetic process	8.01E-03
88	GO:0010143: cutin biosynthetic process	8.28E-03
89	GO:0002237: response to molecule of bacterial origin	8.28E-03
90	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	8.37E-03
91	GO:0070588: calcium ion transmembrane transport	8.97E-03
92	GO:0009225: nucleotide-sugar metabolic process	8.97E-03
93	GO:0010025: wax biosynthetic process	9.68E-03
94	GO:0006487: protein N-linked glycosylation	1.04E-02
95	GO:0009863: salicylic acid mediated signaling pathway	1.04E-02
96	GO:0006874: cellular calcium ion homeostasis	1.12E-02
97	GO:0016998: cell wall macromolecule catabolic process	1.19E-02
98	GO:0032259: methylation	1.25E-02
99	GO:0009814: defense response, incompatible interaction	1.27E-02
100	GO:0007131: reciprocal meiotic recombination	1.27E-02
101	GO:0030433: ubiquitin-dependent ERAD pathway	1.27E-02
102	GO:0009561: megagametogenesis	1.43E-02
103	GO:0009753: response to jasmonic acid	1.44E-02
104	GO:0009058: biosynthetic process	1.51E-02
105	GO:0042147: retrograde transport, endosome to Golgi	1.52E-02
106	GO:0008360: regulation of cell shape	1.69E-02
107	GO:0048544: recognition of pollen	1.78E-02
108	GO:0009749: response to glucose	1.87E-02
109	GO:0010183: pollen tube guidance	1.87E-02
110	GO:0040008: regulation of growth	1.89E-02
111	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.22E-02
112	GO:0006914: autophagy	2.25E-02
113	GO:0009567: double fertilization forming a zygote and endosperm	2.25E-02
114	GO:0019760: glucosinolate metabolic process	2.25E-02
115	GO:0010252: auxin homeostasis	2.25E-02
116	GO:0006904: vesicle docking involved in exocytosis	2.35E-02
117	GO:0009617: response to bacterium	2.37E-02
118	GO:0001666: response to hypoxia	2.55E-02
119	GO:0016126: sterol biosynthetic process	2.55E-02
120	GO:0009607: response to biotic stimulus	2.66E-02
121	GO:0008219: cell death	3.09E-02
122	GO:0009813: flavonoid biosynthetic process	3.20E-02
123	GO:0007568: aging	3.42E-02
124	GO:0006865: amino acid transport	3.54E-02
125	GO:0009723: response to ethylene	3.55E-02
126	GO:0050832: defense response to fungus	3.72E-02
127	GO:0006099: tricarboxylic acid cycle	3.77E-02
128	GO:0046686: response to cadmium ion	3.84E-02
129	GO:0006508: proteolysis	3.93E-02
130	GO:0046777: protein autophosphorylation	4.06E-02
131	GO:0006887: exocytosis	4.13E-02
132	GO:0006631: fatty acid metabolic process	4.13E-02
133	GO:0042542: response to hydrogen peroxide	4.25E-02
134	GO:0009744: response to sucrose	4.37E-02
135	GO:0051707: response to other organism	4.37E-02
136	GO:0000209: protein polyubiquitination	4.50E-02
137	GO:0008643: carbohydrate transport	4.62E-02
138	GO:0009636: response to toxic substance	4.75E-02
139	GO:0006869: lipid transport	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
2	GO:0004631: phosphomevalonate kinase activity	0.00E+00
3	GO:0016504: peptidase activator activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
6	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
7	GO:0003837: beta-ureidopropionase activity	0.00E+00
8	GO:0004164: diphthine synthase activity	0.00E+00
9	GO:0070577: lysine-acetylated histone binding	0.00E+00
10	GO:0050220: prostaglandin-E synthase activity	0.00E+00
11	GO:0005524: ATP binding	1.08E-06
12	GO:0004674: protein serine/threonine kinase activity	2.46E-06
13	GO:0016301: kinase activity	9.04E-05
14	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.00E-04
15	GO:0019707: protein-cysteine S-acyltransferase activity	2.00E-04
16	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.00E-04
17	GO:0042134: rRNA primary transcript binding	2.00E-04
18	GO:0015085: calcium ion transmembrane transporter activity	2.00E-04
19	GO:0004815: aspartate-tRNA ligase activity	2.00E-04
20	GO:0016844: strictosidine synthase activity	2.97E-04
21	GO:0004713: protein tyrosine kinase activity	3.48E-04
22	GO:0045140: inositol phosphoceramide synthase activity	4.48E-04
23	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	4.48E-04
24	GO:0042937: tripeptide transporter activity	4.48E-04
25	GO:0004566: beta-glucuronidase activity	4.48E-04
26	GO:0050291: sphingosine N-acyltransferase activity	4.48E-04
27	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	4.48E-04
28	GO:0032934: sterol binding	4.48E-04
29	GO:0019779: Atg8 activating enzyme activity	4.48E-04
30	GO:0004663: Rab geranylgeranyltransferase activity	7.29E-04
31	GO:0004383: guanylate cyclase activity	7.29E-04
32	GO:0016805: dipeptidase activity	7.29E-04
33	GO:0005093: Rab GDP-dissociation inhibitor activity	7.29E-04
34	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	7.29E-04
35	GO:0042781: 3'-tRNA processing endoribonuclease activity	7.29E-04
36	GO:0004792: thiosulfate sulfurtransferase activity	1.04E-03
37	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.04E-03
38	GO:0070628: proteasome binding	1.38E-03
39	GO:0042936: dipeptide transporter activity	1.38E-03
40	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.76E-03
41	GO:0045431: flavonol synthase activity	1.76E-03
42	GO:0008641: small protein activating enzyme activity	1.76E-03
43	GO:0048040: UDP-glucuronate decarboxylase activity	2.17E-03
44	GO:0070403: NAD+ binding	2.60E-03
45	GO:0102391: decanoate--CoA ligase activity	2.60E-03
46	GO:0004012: phospholipid-translocating ATPase activity	2.60E-03
47	GO:0004620: phospholipase activity	3.06E-03
48	GO:0004467: long-chain fatty acid-CoA ligase activity	3.06E-03
49	GO:0008235: metalloexopeptidase activity	3.06E-03
50	GO:0042162: telomeric DNA binding	3.06E-03
51	GO:0003872: 6-phosphofructokinase activity	3.06E-03
52	GO:0052747: sinapyl alcohol dehydrogenase activity	3.55E-03
53	GO:0004708: MAP kinase kinase activity	3.55E-03
54	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.55E-03
55	GO:0008142: oxysterol binding	4.06E-03
56	GO:0003843: 1,3-beta-D-glucan synthase activity	4.06E-03
57	GO:0004003: ATP-dependent DNA helicase activity	4.60E-03
58	GO:0003678: DNA helicase activity	4.60E-03
59	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.04E-03
60	GO:0047617: acyl-CoA hydrolase activity	5.15E-03
61	GO:0004364: glutathione transferase activity	5.71E-03
62	GO:0008171: O-methyltransferase activity	5.74E-03
63	GO:0004177: aminopeptidase activity	6.34E-03
64	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.96E-03
65	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.61E-03
66	GO:0005388: calcium-transporting ATPase activity	7.61E-03
67	GO:0005217: intracellular ligand-gated ion channel activity	8.97E-03
68	GO:0004970: ionotropic glutamate receptor activity	8.97E-03
69	GO:0004190: aspartic-type endopeptidase activity	8.97E-03
70	GO:0003954: NADH dehydrogenase activity	1.04E-02
71	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.19E-02
72	GO:0008514: organic anion transmembrane transporter activity	1.43E-02
73	GO:0046872: metal ion binding	1.83E-02
74	GO:0003684: damaged DNA binding	2.25E-02
75	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.35E-02
76	GO:0008237: metallopeptidase activity	2.35E-02
77	GO:0030247: polysaccharide binding	2.87E-02
78	GO:0004683: calmodulin-dependent protein kinase activity	2.87E-02
79	GO:0008168: methyltransferase activity	2.95E-02
80	GO:0005096: GTPase activator activity	3.20E-02
81	GO:0043531: ADP binding	3.36E-02
82	GO:0030145: manganese ion binding	3.42E-02
83	GO:0016740: transferase activity	3.47E-02
84	GO:0003697: single-stranded DNA binding	3.65E-02
85	GO:0061630: ubiquitin protein ligase activity	3.99E-02
86	GO:0005516: calmodulin binding	4.49E-02
87	GO:0015293: symporter activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.56E-07
2	GO:0005829: cytosol	5.88E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	2.00E-04
4	GO:0000138: Golgi trans cisterna	2.00E-04
5	GO:0043564: Ku70:Ku80 complex	2.00E-04
6	GO:0005783: endoplasmic reticulum	2.24E-04
7	GO:0031304: intrinsic component of mitochondrial inner membrane	4.48E-04
8	GO:0070062: extracellular exosome	1.04E-03
9	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.04E-03
10	GO:0005945: 6-phosphofructokinase complex	1.76E-03
11	GO:0008250: oligosaccharyltransferase complex	1.76E-03
12	GO:0030904: retromer complex	2.17E-03
13	GO:0030687: preribosome, large subunit precursor	3.06E-03
14	GO:0000784: nuclear chromosome, telomeric region	4.06E-03
15	GO:0000148: 1,3-beta-D-glucan synthase complex	4.06E-03
16	GO:0005765: lysosomal membrane	6.34E-03
17	GO:0016021: integral component of membrane	7.66E-03
18	GO:0005769: early endosome	9.68E-03
19	GO:0005794: Golgi apparatus	1.00E-02
20	GO:0005839: proteasome core complex	1.19E-02
21	GO:0005789: endoplasmic reticulum membrane	1.21E-02
22	GO:0005802: trans-Golgi network	1.41E-02
23	GO:0005730: nucleolus	1.44E-02
24	GO:0000790: nuclear chromatin	1.52E-02
25	GO:0019898: extrinsic component of membrane	1.87E-02
26	GO:0009504: cell plate	1.87E-02
27	GO:0000145: exocyst	2.06E-02
28	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.36E-02
29	GO:0031902: late endosome membrane	4.13E-02
30	GO:0090406: pollen tube	4.37E-02