Gene: AT1G31540
     

Gene description


TAIR ID: AT1G31540

Short description: Disease resistance protein (TIR-NBS-LRR class) family

Pathogen responsiveness: -1.11

General responsiveness: -3.74

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response


GO cellular component


cytoplasm, plasmodesma


GO molecular function


unkown


Protein domain


PfamPF01582, TIR domain
PfamPF07725, Leucine Rich Repeat
PfamPF00931, NB-ARC domain
SMARTSM00382, AAA
SMARTSM00255, TIR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G56110, AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.771.20E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.861.55E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.361.09E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.691.59E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.941.67E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.204.68E-10
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.802.33E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.604.27E-02






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