Gene: AT1G29900
     

Gene description


TAIR ID: AT1G29900

Short description: carbamoyl phosphate synthetase B

Pathogen responsiveness: -1.30

General responsiveness: -2.27

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G700683  

Wheat: No orthologous gene

GO biological process


arginine biosynthetic process, cellular response to phosphate starvation, 'de novo' UMP biosynthetic process, urea cycle


GO cellular component


chloroplast, mitochondrion, chloroplast stroma, membrane


GO molecular function


ATP binding, carbamoyl-phosphate synthase (ammonia) activity, carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, metal ion binding


Protein domain


PfamPF02142, MGS-like domain
PfamPF02786, Carbamoyl-phosphate synthase L chain, ATP binding domain
PfamPF02787, Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SMARTSM00851, MGS
SMARTSM01096, CPSase_L_D3

Transcriptional regulation


Regulator:
AT5G13790, AT1G73805, AT5G26920

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.451.11E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.774.56E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.757.74E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.594.40E-12






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