GO Enrichment Analysis of Co-expressed Genes with
AT1G29900
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
2 | GO:0010480: microsporocyte differentiation | 0.00E+00 |
3 | GO:0015843: methylammonium transport | 0.00E+00 |
4 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
5 | GO:1901698: response to nitrogen compound | 0.00E+00 |
6 | GO:0007638: mechanosensory behavior | 0.00E+00 |
7 | GO:0007172: signal complex assembly | 0.00E+00 |
8 | GO:0010068: protoderm histogenesis | 0.00E+00 |
9 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.15E-07 |
10 | GO:0009934: regulation of meristem structural organization | 1.13E-05 |
11 | GO:0009165: nucleotide biosynthetic process | 1.55E-05 |
12 | GO:0006468: protein phosphorylation | 4.00E-05 |
13 | GO:0048437: floral organ development | 7.18E-05 |
14 | GO:0006264: mitochondrial DNA replication | 1.37E-04 |
15 | GO:0043609: regulation of carbon utilization | 1.37E-04 |
16 | GO:0033259: plastid DNA replication | 1.37E-04 |
17 | GO:0048229: gametophyte development | 2.39E-04 |
18 | GO:0010582: floral meristem determinacy | 2.75E-04 |
19 | GO:0010075: regulation of meristem growth | 3.14E-04 |
20 | GO:0009786: regulation of asymmetric cell division | 3.16E-04 |
21 | GO:0010254: nectary development | 3.16E-04 |
22 | GO:0010569: regulation of double-strand break repair via homologous recombination | 3.16E-04 |
23 | GO:0010434: bract formation | 3.16E-04 |
24 | GO:0080175: phragmoplast microtubule organization | 3.16E-04 |
25 | GO:0048439: flower morphogenesis | 3.16E-04 |
26 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.93E-04 |
27 | GO:0009954: proximal/distal pattern formation | 5.20E-04 |
28 | GO:0051127: positive regulation of actin nucleation | 5.20E-04 |
29 | GO:0006000: fructose metabolic process | 5.20E-04 |
30 | GO:0071705: nitrogen compound transport | 5.20E-04 |
31 | GO:0006306: DNA methylation | 5.96E-04 |
32 | GO:0030154: cell differentiation | 6.70E-04 |
33 | GO:1902476: chloride transmembrane transport | 7.44E-04 |
34 | GO:0007231: osmosensory signaling pathway | 7.44E-04 |
35 | GO:0051639: actin filament network formation | 7.44E-04 |
36 | GO:0044211: CTP salvage | 7.44E-04 |
37 | GO:0019048: modulation by virus of host morphology or physiology | 7.44E-04 |
38 | GO:0031048: chromatin silencing by small RNA | 7.44E-04 |
39 | GO:0009800: cinnamic acid biosynthetic process | 7.44E-04 |
40 | GO:0048645: animal organ formation | 7.44E-04 |
41 | GO:0015696: ammonium transport | 7.44E-04 |
42 | GO:0046739: transport of virus in multicellular host | 7.44E-04 |
43 | GO:2000904: regulation of starch metabolic process | 7.44E-04 |
44 | GO:0046777: protein autophosphorylation | 8.06E-04 |
45 | GO:0048653: anther development | 8.93E-04 |
46 | GO:0006342: chromatin silencing | 9.59E-04 |
47 | GO:0009958: positive gravitropism | 9.59E-04 |
48 | GO:0051764: actin crosslink formation | 9.85E-04 |
49 | GO:0071249: cellular response to nitrate | 9.85E-04 |
50 | GO:0072488: ammonium transmembrane transport | 9.85E-04 |
51 | GO:0022622: root system development | 9.85E-04 |
52 | GO:0051567: histone H3-K9 methylation | 9.85E-04 |
53 | GO:0044206: UMP salvage | 9.85E-04 |
54 | GO:0033500: carbohydrate homeostasis | 9.85E-04 |
55 | GO:1902183: regulation of shoot apical meristem development | 1.25E-03 |
56 | GO:0051225: spindle assembly | 1.25E-03 |
57 | GO:0010158: abaxial cell fate specification | 1.25E-03 |
58 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 1.25E-03 |
59 | GO:0006544: glycine metabolic process | 1.25E-03 |
60 | GO:0016458: gene silencing | 1.53E-03 |
61 | GO:0006563: L-serine metabolic process | 1.53E-03 |
62 | GO:0010405: arabinogalactan protein metabolic process | 1.53E-03 |
63 | GO:0009959: negative gravitropism | 1.53E-03 |
64 | GO:0006559: L-phenylalanine catabolic process | 1.53E-03 |
65 | GO:0006206: pyrimidine nucleobase metabolic process | 1.53E-03 |
66 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.53E-03 |
67 | GO:0006139: nucleobase-containing compound metabolic process | 1.53E-03 |
68 | GO:0051607: defense response to virus | 1.59E-03 |
69 | GO:0030488: tRNA methylation | 1.83E-03 |
70 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.83E-03 |
71 | GO:0007166: cell surface receptor signaling pathway | 2.14E-03 |
72 | GO:0032880: regulation of protein localization | 2.15E-03 |
73 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 2.15E-03 |
74 | GO:0010161: red light signaling pathway | 2.15E-03 |
75 | GO:0009610: response to symbiotic fungus | 2.15E-03 |
76 | GO:0010050: vegetative phase change | 2.15E-03 |
77 | GO:0006821: chloride transport | 2.15E-03 |
78 | GO:0000160: phosphorelay signal transduction system | 2.29E-03 |
79 | GO:0030162: regulation of proteolysis | 2.49E-03 |
80 | GO:0009850: auxin metabolic process | 2.49E-03 |
81 | GO:0007389: pattern specification process | 2.85E-03 |
82 | GO:0010099: regulation of photomorphogenesis | 2.85E-03 |
83 | GO:0006002: fructose 6-phosphate metabolic process | 2.85E-03 |
84 | GO:0009827: plant-type cell wall modification | 2.85E-03 |
85 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.85E-03 |
86 | GO:0010100: negative regulation of photomorphogenesis | 2.85E-03 |
87 | GO:0006783: heme biosynthetic process | 3.22E-03 |
88 | GO:0000373: Group II intron splicing | 3.22E-03 |
89 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.22E-03 |
90 | GO:2000024: regulation of leaf development | 3.22E-03 |
91 | GO:0009638: phototropism | 3.60E-03 |
92 | GO:0035999: tetrahydrofolate interconversion | 3.60E-03 |
93 | GO:0030422: production of siRNA involved in RNA interference | 4.00E-03 |
94 | GO:0048829: root cap development | 4.00E-03 |
95 | GO:0009299: mRNA transcription | 4.00E-03 |
96 | GO:0006535: cysteine biosynthetic process from serine | 4.00E-03 |
97 | GO:0006816: calcium ion transport | 4.42E-03 |
98 | GO:0009736: cytokinin-activated signaling pathway | 4.75E-03 |
99 | GO:0015706: nitrate transport | 4.85E-03 |
100 | GO:0006006: glucose metabolic process | 5.30E-03 |
101 | GO:0030036: actin cytoskeleton organization | 5.30E-03 |
102 | GO:0009725: response to hormone | 5.30E-03 |
103 | GO:0009767: photosynthetic electron transport chain | 5.30E-03 |
104 | GO:2000012: regulation of auxin polar transport | 5.30E-03 |
105 | GO:0009785: blue light signaling pathway | 5.30E-03 |
106 | GO:0010020: chloroplast fission | 5.76E-03 |
107 | GO:0048367: shoot system development | 5.80E-03 |
108 | GO:0070588: calcium ion transmembrane transport | 6.23E-03 |
109 | GO:0010167: response to nitrate | 6.23E-03 |
110 | GO:0009740: gibberellic acid mediated signaling pathway | 6.36E-03 |
111 | GO:0006071: glycerol metabolic process | 6.71E-03 |
112 | GO:0048364: root development | 7.13E-03 |
113 | GO:0051017: actin filament bundle assembly | 7.22E-03 |
114 | GO:0005992: trehalose biosynthetic process | 7.22E-03 |
115 | GO:0019344: cysteine biosynthetic process | 7.22E-03 |
116 | GO:0009116: nucleoside metabolic process | 7.22E-03 |
117 | GO:0010187: negative regulation of seed germination | 7.22E-03 |
118 | GO:0006825: copper ion transport | 7.73E-03 |
119 | GO:0010227: floral organ abscission | 9.35E-03 |
120 | GO:0009686: gibberellin biosynthetic process | 9.35E-03 |
121 | GO:0010082: regulation of root meristem growth | 9.35E-03 |
122 | GO:0008284: positive regulation of cell proliferation | 1.05E-02 |
123 | GO:0042335: cuticle development | 1.11E-02 |
124 | GO:0009735: response to cytokinin | 1.25E-02 |
125 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.31E-02 |
126 | GO:0071554: cell wall organization or biogenesis | 1.36E-02 |
127 | GO:0031047: gene silencing by RNA | 1.42E-02 |
128 | GO:0071281: cellular response to iron ion | 1.49E-02 |
129 | GO:0010252: auxin homeostasis | 1.55E-02 |
130 | GO:0010029: regulation of seed germination | 1.83E-02 |
131 | GO:0009816: defense response to bacterium, incompatible interaction | 1.83E-02 |
132 | GO:0015995: chlorophyll biosynthetic process | 1.98E-02 |
133 | GO:0010311: lateral root formation | 2.20E-02 |
134 | GO:0006499: N-terminal protein myristoylation | 2.28E-02 |
135 | GO:0048527: lateral root development | 2.36E-02 |
136 | GO:0006839: mitochondrial transport | 2.76E-02 |
137 | GO:0009926: auxin polar transport | 3.01E-02 |
138 | GO:0008643: carbohydrate transport | 3.19E-02 |
139 | GO:0006855: drug transmembrane transport | 3.36E-02 |
140 | GO:0031347: regulation of defense response | 3.45E-02 |
141 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.45E-02 |
142 | GO:0006260: DNA replication | 3.45E-02 |
143 | GO:0016310: phosphorylation | 3.46E-02 |
144 | GO:0006857: oligopeptide transport | 3.91E-02 |
145 | GO:0006417: regulation of translation | 4.00E-02 |
146 | GO:0048316: seed development | 4.29E-02 |
147 | GO:0009734: auxin-activated signaling pathway | 4.66E-02 |
148 | GO:0006508: proteolysis | 4.77E-02 |
149 | GO:0009624: response to nematode | 4.78E-02 |
150 | GO:0006396: RNA processing | 4.88E-02 |
151 | GO:0009742: brassinosteroid mediated signaling pathway | 4.98E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
2 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
3 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
4 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
5 | GO:0004674: protein serine/threonine kinase activity | 1.03E-07 |
6 | GO:0016301: kinase activity | 9.00E-07 |
7 | GO:0033612: receptor serine/threonine kinase binding | 2.74E-05 |
8 | GO:0005524: ATP binding | 4.13E-05 |
9 | GO:0004008: copper-exporting ATPase activity | 1.37E-04 |
10 | GO:0010313: phytochrome binding | 1.37E-04 |
11 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 1.37E-04 |
12 | GO:0005515: protein binding | 2.26E-04 |
13 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.39E-04 |
14 | GO:0050017: L-3-cyanoalanine synthase activity | 3.16E-04 |
15 | GO:0043425: bHLH transcription factor binding | 3.16E-04 |
16 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.16E-04 |
17 | GO:0043621: protein self-association | 4.46E-04 |
18 | GO:0045548: phenylalanine ammonia-lyase activity | 5.20E-04 |
19 | GO:0008253: 5'-nucleotidase activity | 5.20E-04 |
20 | GO:0032549: ribonucleoside binding | 5.20E-04 |
21 | GO:0004749: ribose phosphate diphosphokinase activity | 7.44E-04 |
22 | GO:0035197: siRNA binding | 7.44E-04 |
23 | GO:0004845: uracil phosphoribosyltransferase activity | 9.85E-04 |
24 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 9.85E-04 |
25 | GO:0008409: 5'-3' exonuclease activity | 9.85E-04 |
26 | GO:0019199: transmembrane receptor protein kinase activity | 9.85E-04 |
27 | GO:0005253: anion channel activity | 9.85E-04 |
28 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.25E-03 |
29 | GO:0004372: glycine hydroxymethyltransferase activity | 1.25E-03 |
30 | GO:0051015: actin filament binding | 1.33E-03 |
31 | GO:0000156: phosphorelay response regulator activity | 1.33E-03 |
32 | GO:0004252: serine-type endopeptidase activity | 1.37E-03 |
33 | GO:0008519: ammonium transmembrane transporter activity | 1.53E-03 |
34 | GO:0005247: voltage-gated chloride channel activity | 1.53E-03 |
35 | GO:2001070: starch binding | 1.53E-03 |
36 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.53E-03 |
37 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.65E-03 |
38 | GO:0004124: cysteine synthase activity | 1.83E-03 |
39 | GO:0004849: uridine kinase activity | 1.83E-03 |
40 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 2.85E-03 |
41 | GO:0005375: copper ion transmembrane transporter activity | 2.85E-03 |
42 | GO:0008173: RNA methyltransferase activity | 2.85E-03 |
43 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.22E-03 |
44 | GO:0009672: auxin:proton symporter activity | 3.60E-03 |
45 | GO:0004805: trehalose-phosphatase activity | 4.00E-03 |
46 | GO:0001054: RNA polymerase I activity | 4.42E-03 |
47 | GO:0004672: protein kinase activity | 4.51E-03 |
48 | GO:0004521: endoribonuclease activity | 4.85E-03 |
49 | GO:0005262: calcium channel activity | 5.30E-03 |
50 | GO:0010329: auxin efflux transmembrane transporter activity | 5.30E-03 |
51 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.30E-03 |
52 | GO:0004871: signal transducer activity | 5.49E-03 |
53 | GO:0008083: growth factor activity | 5.76E-03 |
54 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.76E-03 |
55 | GO:0003887: DNA-directed DNA polymerase activity | 6.71E-03 |
56 | GO:0005345: purine nucleobase transmembrane transporter activity | 7.73E-03 |
57 | GO:0030170: pyridoxal phosphate binding | 9.39E-03 |
58 | GO:0008514: organic anion transmembrane transporter activity | 9.92E-03 |
59 | GO:0005215: transporter activity | 1.06E-02 |
60 | GO:0016759: cellulose synthase activity | 1.55E-02 |
61 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.62E-02 |
62 | GO:0016413: O-acetyltransferase activity | 1.69E-02 |
63 | GO:0008236: serine-type peptidase activity | 2.05E-02 |
64 | GO:0015238: drug transmembrane transporter activity | 2.20E-02 |
65 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.28E-02 |
66 | GO:0050661: NADP binding | 2.76E-02 |
67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.19E-02 |
68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.72E-02 |
69 | GO:0031625: ubiquitin protein ligase binding | 4.00E-02 |
70 | GO:0016874: ligase activity | 4.58E-02 |
71 | GO:0003779: actin binding | 4.68E-02 |
72 | GO:0046983: protein dimerization activity | 4.84E-02 |