Gene: AT1G29240
     


Gene description


TAIR ID: AT1G29240

Short description: Protein of unknown function (DUF688)

Pathogen responsiveness: -0.49

General responsiveness: -0.93

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


translational initiation


GO cellular component


nucleus


GO molecular function


translation initiation factor activity


Protein domain


PfamPF05097, Protein of unknown function (DUF688)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


17 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.068.69E-08
GSE17464Penta, controlPenta, PstDC3000 12 h2.571.84E-10
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.616.22E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.765.24E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.943.02E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.079.07E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.789.97E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.047.06E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.681.15E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.749.02E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.631.45E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.734.36E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.742.55E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.793.43E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.549.77E-15
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.764.23E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.711.17E-02






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