gene detail

Gene description

TAIR ID: AT1G27760

Short description: interferon-related developmental regulator family protein / IFRD protein family

Pathogen responsiveness: -0.56

General responsiveness: -0.76

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G007060

Wheat: No orthologous gene

GO biological process

response to salt stress

GO cellular component

nucleus, cytoplasm

GO molecular function

unkown

Protein domain

Pfam	PF05004, Interferon-related developmental regulator (IFRD)
Pfam	PF04836, Interferon-related protein conserved region

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G18770

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-2.26	3.53E-12
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-1.54	2.85E-07
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.62	8.36E-08
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.65	8.85E-06
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.61	4.69E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.58	4.68E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.54	8.12E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.99	1.89E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.96	2.54E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.25	2.78E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.78	5.36E-13
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.68	3.94E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.70	1.06E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.15	3.14E-13
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.78	5.21E-10
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	1.97	1.77E-02
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	1.69	1.10E-02