gene detail

Gene description

TAIR ID: AT1G25500

Short description: Plasma-membrane choline transporter family protein

Pathogen responsiveness: -0.11

General responsiveness: -1.84

Orthologous

Rice:

OS02G0580100 OS03G0651300

Maize:

GRMZM5G896337

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

plasma membrane, integral component of membrane, chloroplast

GO molecular function

unkown

Protein domain

Pfam	PF04515, Plasma-membrane choline transporter

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

20 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.15	1.99E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.98	1.78E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.26	1.11E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.28	5.78E-11
GSE21920	Col, ulp1, mock	Col, ulp1, Pto 6 h	1.82	2.19E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.54	9.66E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.31	1.21E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.35	4.19E-06
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.62	2.45E-08
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.35	4.07E-11
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	3.26	4.47E-11
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	3.03	3.61E-12
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.43	6.50E-18
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.09	3.34E-14
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.71	9.48E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.95	3.29E-13
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.64	3.00E-09
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	2.13	2.08E-14
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.58	2.90E-09
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.70	8.01E-05