gene detail

Gene description

TAIR ID: AT1G24706

Short description: THO2

Pathogen responsiveness: -3.75

General responsiveness: -3.02

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

production of miRNAs involved in gene silencing by miRNA, mRNA export from nucleus, miRNA transport

GO cellular component

nuclear speck, nucleus, THO complex part of transcription export complex

GO molecular function

mRNA binding

Protein domain

Pfam	PF11732, Transcription- and export-related complex subunit
Pfam	PF16134, THO complex subunit 2 N-terminus
Pfam	PF11262, Transcription factor/nuclear export subunit protein 2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome
PATH:ath03013: RNA transport

Transcriptional regulation

Regulator:
AT5G13790, AT4G18770

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

No coexpression gene

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.50	3.11E-02