Gene: AT1G23860
     

Gene description


TAIR ID: AT1G23860

Short description: RS-containing zinc finger protein 21

Pathogen responsiveness: -2.86

General responsiveness: -2.62

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


mRNA splicing, via spliceosome


GO cellular component


nucleus, spliceosomal complex, nuclear speck


GO molecular function


protein binding, zinc ion binding, nucleic acid binding


Protein domain


PfamPF00098, Zinc knuckle
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM
SMARTSM00343, ZnF_C2HC

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850, AT2G47190

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 14 (Top20%)

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.561.67E-09






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