gene detail

Gene description

TAIR ID: AT1G23080

Short description: Auxin efflux carrier family protein

Pathogen responsiveness: 0.47

General responsiveness: 0.34

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

root development, auxin polar transport, longitudinal axis specification, auxin-activated signaling pathway, transmembrane transport, pattern specification process, auxin homeostasis

GO cellular component

membrane, plasma membrane, plasmodesma, integral component of membrane, endoplasmic reticulum

GO molecular function

transporter activity, auxin efflux transmembrane transporter activity, auxin:proton symporter activity

Protein domain

Pfam	PF03547, Membrane transport protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT4G00220, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 20 (Top10%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

31 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	2.17	1.55E-08
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	2.15	2.26E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.83	2.27E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.75	7.92E-08
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.54	2.66E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.51	6.55E-04
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.54	6.81E-10
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-1.61	2.53E-02
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.62	2.98E-04
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.66	3.54E-04

Showing 1 to 10 of 31 entries

Previous1 2 3 4Next