Gene: AT1G23030
     


Gene description


TAIR ID: AT1G23030

Short description: ARM repeat superfamily protein

Pathogen responsiveness: -1.10

General responsiveness: -0.79

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to chitin, protein ubiquitination, protein autoubiquitination


GO cellular component


cytoplasm, nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF00514, Armadillo/beta-catenin-like repeat
PfamPF04564, U-box domain
SMARTSM00504, Ubox
SMARTSM00185, ARM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G47640

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h1.723.84E-03
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.501.28E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.071.50E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.818.56E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.773.76E-12
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.765.63E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.973.11E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.031.74E-08
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.532.13E-02






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