gene detail

Gene description

TAIR ID: AT1G22490

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -2.30

General responsiveness: -3.14

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding, protein dimerization activity, DNA binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT5G13790, AT2G38250, AT1G62300, AT5G22570, AT2G46130, AT1G24260, AT4G31550

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE56094_WT_HRPA- view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.51	4.18E-02
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.74	9.32E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.79	6.92E-03