gene detail

Gene description

TAIR ID: AT1G22190

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: -1.09

General responsiveness: 0.47

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to cold, regulation of transcription, DNA-templated, response to water deprivation, ethylene-activated signaling pathway, transcription, response to osmotic stress

GO cellular component

nucleus

GO molecular function

protein binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00847, AP2 domain
SMART	SM00380, AP2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT2G20180

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 16 (Top20%)

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	2.36	1.55E-06
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	2.35	1.79E-06
GSE17464	Penta, control	Penta, Flg22 2 h	-1.60	2.94E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.54	2.25E-02