Gene: AT1G21550
     

Gene description


TAIR ID: AT1G21550

Short description: Calcium-binding EF-hand family protein

Pathogen responsiveness: 1.64

General responsiveness: 1.28

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF13499, EF-hand domain pair
PfamPF00036, EF hand
SMARTSM00054, EFh

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G24050, AT1G24260, AT5G41315

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


46 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d1.881.47E-06
GSE17464Laer, controlLaer, Flg22 1 h2.652.52E-05
GSE17464Laer, controlLaer, Flg22 2 h2.058.87E-04
GSE17464Penta, controlPenta, PstDC3000 12 h-2.272.49E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.451.13E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.664.16E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.537.80E-04
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h1.734.76E-10
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h4.462.31E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.901.33E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h2.271.28E-05
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d2.441.23E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.603.66E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.281.47E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.702.34E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.467.16E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV2.108.16E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.161.49E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.271.29E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.571.71E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.001.89E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.081.07E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h4.299.17E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.222.94E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.741.91E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.304.68E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h4.521.55E-12
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h4.391.46E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.944.81E-04
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.592.12E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.574.99E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.812.28E-02
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.924.76E-04
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.851.18E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h3.734.15E-09
GSE5615Col, WT, water 4 hCol, WT, LPS 4 h1.633.13E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h3.193.44E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.082.34E-03
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h2.803.15E-05
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h3.883.56E-07
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h4.232.35E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h4.325.51E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min3.432.21E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h4.422.50E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h4.872.92E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min3.406.65E-04






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