gene detail

Gene description

TAIR ID: AT1G20200

Short description: PAM domain (PCI/PINT associated module) protein

Pathogen responsiveness: -1.76

General responsiveness: -2.23

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

embryo development ending in seed dormancy, regulation of protein catabolic process, ubiquitin-dependent protein catabolic process

GO cellular component

proteasome regulatory particle, lid subcomplex, plasmodesma, plasma membrane, nucleus, cytosol

GO molecular function

enzyme regulator activity

Protein domain

Pfam	PF08375, Proteasome regulatory subunit C-terminal
Pfam	PF01399, PCI domain
SMART	SM00088, PINT
SMART	SM00753, PAM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03050: Proteasome

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 8

Coexpression network

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.53	9.78E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.54	9.25E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.59	6.44E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.77	1.14E-12