GO Enrichment Analysis of Co-expressed Genes with
AT1G20200
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006489: dolichyl diphosphate biosynthetic process | 0.00E+00 |
| 2 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.68E-29 |
| 3 | GO:0030163: protein catabolic process | 1.68E-12 |
| 4 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 7.77E-12 |
| 5 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.52E-09 |
| 6 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.84E-09 |
| 7 | GO:0051788: response to misfolded protein | 6.26E-08 |
| 8 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.55E-07 |
| 9 | GO:0043248: proteasome assembly | 3.09E-06 |
| 10 | GO:0042176: regulation of protein catabolic process | 3.09E-06 |
| 11 | GO:0045087: innate immune response | 1.43E-05 |
| 12 | GO:0035266: meristem growth | 3.00E-05 |
| 13 | GO:0007292: female gamete generation | 3.00E-05 |
| 14 | GO:0006434: seryl-tRNA aminoacylation | 3.00E-05 |
| 15 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 3.00E-05 |
| 16 | GO:0034976: response to endoplasmic reticulum stress | 5.28E-05 |
| 17 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 7.58E-05 |
| 18 | GO:0015786: UDP-glucose transport | 7.58E-05 |
| 19 | GO:0045859: regulation of protein kinase activity | 7.58E-05 |
| 20 | GO:0046686: response to cadmium ion | 1.24E-04 |
| 21 | GO:0015783: GDP-fucose transport | 1.32E-04 |
| 22 | GO:0060968: regulation of gene silencing | 1.32E-04 |
| 23 | GO:0055074: calcium ion homeostasis | 1.32E-04 |
| 24 | GO:0072334: UDP-galactose transmembrane transport | 1.97E-04 |
| 25 | GO:0009647: skotomorphogenesis | 1.97E-04 |
| 26 | GO:0001676: long-chain fatty acid metabolic process | 1.97E-04 |
| 27 | GO:0009165: nucleotide biosynthetic process | 2.67E-04 |
| 28 | GO:0048827: phyllome development | 4.20E-04 |
| 29 | GO:0048232: male gamete generation | 4.20E-04 |
| 30 | GO:0009554: megasporogenesis | 5.02E-04 |
| 31 | GO:0006458: 'de novo' protein folding | 5.02E-04 |
| 32 | GO:0009965: leaf morphogenesis | 5.73E-04 |
| 33 | GO:0048528: post-embryonic root development | 5.88E-04 |
| 34 | GO:0031540: regulation of anthocyanin biosynthetic process | 6.76E-04 |
| 35 | GO:0010078: maintenance of root meristem identity | 6.76E-04 |
| 36 | GO:0043562: cellular response to nitrogen levels | 7.68E-04 |
| 37 | GO:0006002: fructose 6-phosphate metabolic process | 7.68E-04 |
| 38 | GO:0098656: anion transmembrane transport | 8.63E-04 |
| 39 | GO:0043067: regulation of programmed cell death | 9.61E-04 |
| 40 | GO:0010449: root meristem growth | 9.61E-04 |
| 41 | GO:0009735: response to cytokinin | 9.86E-04 |
| 42 | GO:0048829: root cap development | 1.06E-03 |
| 43 | GO:0048229: gametophyte development | 1.16E-03 |
| 44 | GO:0010015: root morphogenesis | 1.16E-03 |
| 45 | GO:0007275: multicellular organism development | 1.17E-03 |
| 46 | GO:0006820: anion transport | 1.27E-03 |
| 47 | GO:0010102: lateral root morphogenesis | 1.38E-03 |
| 48 | GO:0009933: meristem structural organization | 1.50E-03 |
| 49 | GO:0006457: protein folding | 1.51E-03 |
| 50 | GO:0090351: seedling development | 1.61E-03 |
| 51 | GO:0006487: protein N-linked glycosylation | 1.86E-03 |
| 52 | GO:0009116: nucleoside metabolic process | 1.86E-03 |
| 53 | GO:0015992: proton transport | 2.11E-03 |
| 54 | GO:0061077: chaperone-mediated protein folding | 2.11E-03 |
| 55 | GO:0008033: tRNA processing | 2.80E-03 |
| 56 | GO:0009556: microsporogenesis | 3.24E-03 |
| 57 | GO:0048825: cotyledon development | 3.24E-03 |
| 58 | GO:0010193: response to ozone | 3.40E-03 |
| 59 | GO:0045454: cell redox homeostasis | 3.63E-03 |
| 60 | GO:0009408: response to heat | 4.47E-03 |
| 61 | GO:0048364: root development | 4.66E-03 |
| 62 | GO:0042128: nitrate assimilation | 4.70E-03 |
| 63 | GO:0016049: cell growth | 5.05E-03 |
| 64 | GO:0010311: lateral root formation | 5.41E-03 |
| 65 | GO:0006499: N-terminal protein myristoylation | 5.60E-03 |
| 66 | GO:0010043: response to zinc ion | 5.78E-03 |
| 67 | GO:0006631: fatty acid metabolic process | 6.94E-03 |
| 68 | GO:0009744: response to sucrose | 7.34E-03 |
| 69 | GO:0008283: cell proliferation | 7.34E-03 |
| 70 | GO:0009793: embryo development ending in seed dormancy | 7.69E-03 |
| 71 | GO:0009736: cytokinin-activated signaling pathway | 9.03E-03 |
| 72 | GO:0006096: glycolytic process | 1.02E-02 |
| 73 | GO:0048367: shoot system development | 1.04E-02 |
| 74 | GO:0048316: seed development | 1.04E-02 |
| 75 | GO:0009553: embryo sac development | 1.13E-02 |
| 76 | GO:0051726: regulation of cell cycle | 1.21E-02 |
| 77 | GO:0009651: response to salt stress | 1.23E-02 |
| 78 | GO:0009790: embryo development | 1.51E-02 |
| 79 | GO:0006633: fatty acid biosynthetic process | 1.59E-02 |
| 80 | GO:0009617: response to bacterium | 1.93E-02 |
| 81 | GO:0048366: leaf development | 2.61E-02 |
| 82 | GO:0015979: photosynthesis | 2.98E-02 |
| 83 | GO:0009751: response to salicylic acid | 3.54E-02 |
| 84 | GO:0016310: phosphorylation | 3.94E-02 |
| 85 | GO:0009734: auxin-activated signaling pathway | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0055105: ubiquitin-protein transferase inhibitor activity | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 8.88E-14 |
| 3 | GO:0036402: proteasome-activating ATPase activity | 7.77E-12 |
| 4 | GO:0017025: TBP-class protein binding | 2.03E-09 |
| 5 | GO:0008233: peptidase activity | 1.86E-08 |
| 6 | GO:0016887: ATPase activity | 6.58E-06 |
| 7 | GO:0030234: enzyme regulator activity | 2.10E-05 |
| 8 | GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | 3.00E-05 |
| 9 | GO:0004828: serine-tRNA ligase activity | 3.00E-05 |
| 10 | GO:0004679: AMP-activated protein kinase activity | 3.00E-05 |
| 11 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 7.58E-05 |
| 12 | GO:0005524: ATP binding | 9.70E-05 |
| 13 | GO:0003756: protein disulfide isomerase activity | 1.00E-04 |
| 14 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.32E-04 |
| 15 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 1.32E-04 |
| 16 | GO:0004749: ribose phosphate diphosphokinase activity | 1.97E-04 |
| 17 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 1.97E-04 |
| 18 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.97E-04 |
| 19 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.42E-04 |
| 20 | GO:0102391: decanoate--CoA ligase activity | 5.02E-04 |
| 21 | GO:0019887: protein kinase regulator activity | 5.02E-04 |
| 22 | GO:0004467: long-chain fatty acid-CoA ligase activity | 5.88E-04 |
| 23 | GO:0004427: inorganic diphosphatase activity | 5.88E-04 |
| 24 | GO:0003872: 6-phosphofructokinase activity | 5.88E-04 |
| 25 | GO:0015288: porin activity | 6.76E-04 |
| 26 | GO:0008308: voltage-gated anion channel activity | 7.68E-04 |
| 27 | GO:0051082: unfolded protein binding | 9.54E-04 |
| 28 | GO:0044183: protein binding involved in protein folding | 1.16E-03 |
| 29 | GO:0004175: endopeptidase activity | 1.50E-03 |
| 30 | GO:0043130: ubiquitin binding | 1.86E-03 |
| 31 | GO:0008514: organic anion transmembrane transporter activity | 2.52E-03 |
| 32 | GO:0010181: FMN binding | 3.09E-03 |
| 33 | GO:0051539: 4 iron, 4 sulfur cluster binding | 6.74E-03 |
| 34 | GO:0008026: ATP-dependent helicase activity | 1.21E-02 |
| 35 | GO:0016829: lyase activity | 1.43E-02 |
| 36 | GO:0003743: translation initiation factor activity | 1.90E-02 |
| 37 | GO:0000287: magnesium ion binding | 2.29E-02 |
| 38 | GO:0005515: protein binding | 3.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0000502: proteasome complex | 1.63E-44 |
| 4 | GO:0008541: proteasome regulatory particle, lid subcomplex | 4.46E-18 |
| 5 | GO:0031595: nuclear proteasome complex | 3.20E-17 |
| 6 | GO:0008540: proteasome regulatory particle, base subcomplex | 9.03E-16 |
| 7 | GO:0005829: cytosol | 2.61E-14 |
| 8 | GO:0005839: proteasome core complex | 8.88E-14 |
| 9 | GO:0031597: cytosolic proteasome complex | 1.74E-11 |
| 10 | GO:0005737: cytoplasm | 2.39E-07 |
| 11 | GO:0005838: proteasome regulatory particle | 2.43E-07 |
| 12 | GO:0005774: vacuolar membrane | 8.29E-07 |
| 13 | GO:0005788: endoplasmic reticulum lumen | 6.68E-06 |
| 14 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.10E-05 |
| 15 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 3.00E-05 |
| 16 | GO:0046861: glyoxysomal membrane | 1.32E-04 |
| 17 | GO:0005773: vacuole | 2.51E-04 |
| 18 | GO:0009506: plasmodesma | 4.07E-04 |
| 19 | GO:0005783: endoplasmic reticulum | 4.47E-04 |
| 20 | GO:0009505: plant-type cell wall | 5.98E-04 |
| 21 | GO:0000326: protein storage vacuole | 7.68E-04 |
| 22 | GO:0046930: pore complex | 7.68E-04 |
| 23 | GO:0009514: glyoxysome | 7.68E-04 |
| 24 | GO:0005769: early endosome | 1.73E-03 |
| 25 | GO:0005741: mitochondrial outer membrane | 2.11E-03 |
| 26 | GO:0005618: cell wall | 3.38E-03 |
| 27 | GO:0005886: plasma membrane | 5.28E-03 |
| 28 | GO:0005819: spindle | 6.54E-03 |
| 29 | GO:0022626: cytosolic ribosome | 7.57E-03 |
| 30 | GO:0016020: membrane | 8.57E-03 |
| 31 | GO:0005802: trans-Golgi network | 1.27E-02 |
| 32 | GO:0009524: phragmoplast | 1.41E-02 |
| 33 | GO:0009705: plant-type vacuole membrane | 1.70E-02 |
| 34 | GO:0005794: Golgi apparatus | 3.26E-02 |
| 35 | GO:0005634: nucleus | 3.27E-02 |
| 36 | GO:0009507: chloroplast | 4.58E-02 |