Gene: AT1G18330
     


Gene description


TAIR ID: AT1G18330

Short description: Homeodomain-like superfamily protein

Pathogen responsiveness: -0.01

General responsiveness: 0.58

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G029850  

Wheat: No orthologous gene

GO biological process


circadian rhythm, response to ethylene, regulation of transcription, DNA-templated, response to cadmium ion, response to salt stress, transcription


GO cellular component


nucleus


GO molecular function


DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G49450, AT2G43010, AT5G10140

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


15 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-3.286.91E-10
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.711.05E-04
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-3.491.30E-10
GSE17464Laer, controlLaer, PstDC3000 12 h-2.064.24E-03
GSE17464Penta, controlPenta, PstDC3000 12 h-2.611.70E-04
GSE17464Penta, controlPenta, Flg22 2 h-3.215.75E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.575.05E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.891.03E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.963.46E-09
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.847.33E-03
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.631.71E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.591.09E-10
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.571.48E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.131.08E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.651.73E-02






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