gene detail

Gene description

TAIR ID: AT1G16360

Short description: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein

Pathogen responsiveness: -1.19

General responsiveness: -3.20

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

integral component of membrane, membrane, Golgi apparatus

GO molecular function

unkown

Protein domain

Pfam	PF03381, LEM3 (ligand-effect modulator 3) family / CDC50 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT5G41315

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_EDS16_GO view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.73	2.11E-06
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.77	1.42E-06
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-3.60	6.29E-17
GSE17464	Penta, control	Penta, PstDC3000 12 h	-3.22	1.44E-14
GSE17464	Penta, control	Penta, Flg22 2 h	-2.00	4.05E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.93	1.05E-02
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.84	2.30E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.65	1.28E-02