gene detail

Gene description

TAIR ID: AT1G15920

Short description: Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Pathogen responsiveness: -1.54

General responsiveness: -2.07

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

transcription, DNA-templated, regulation of transcription, RNA modification

GO cellular component

nucleus, cytoplasm

GO molecular function

ribonuclease activity, metal ion binding, RNA binding

Protein domain

Pfam	PF04857, CAF1 family ribonuclease

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03018: RNA degradation

Transcriptional regulation

Regulator:
AT4G18770, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.68	2.23E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.55	7.26E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.65	2.65E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.85	2.13E-09