gene detail

Gene description

TAIR ID: AT1G15880

Short description: golgi snare 11

Pathogen responsiveness: -1.62

General responsiveness: -2.72

Orthologous

Rice:

OS08G0440000 OS02G0126800

Maize:

GRMZM5G837058

Wheat:

TA.24363.1.S1_AT

GO biological process

protein transport, vesicle fusion, ER to Golgi vesicle-mediated transport, intra-Golgi vesicle-mediated transport, regulation of vesicle targeting, to, from or within Golgi

GO cellular component

Golgi membrane, cis-Golgi network, Golgi medial cisterna, SNARE complex, integral component of membrane, Golgi apparatus

GO molecular function

SNAP receptor activity

Protein domain

Pfam	PF12352, Snare region anchored in the vesicle membrane C-terminus

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04130: SNARE interactions in vesicular transport

Transcriptional regulation

Regulator:
AT1G62300, AT2G43010, AT4G31550

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

5 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.95	2.10E-13
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.94	4.57E-13
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.71	4.98E-12
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.57	1.50E-06
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.52	3.69E-11

Showing 1 to 5 of 5 entries

Previous1Next