gene detail

Gene description

TAIR ID: AT1G12010

Short description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Pathogen responsiveness: -0.48

General responsiveness: 1.80

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ethylene biosynthetic process, oxidation-reduction process, defense response, cellular response to fatty acid

GO cellular component

cytoplasm

GO molecular function

L-ascorbic acid binding, metal ion binding, 1-aminocyclopropane-1-carboxylate oxidase activity

Protein domain

Pfam	PF14226, non-haem dioxygenase in morphine synthesis N-terminal
Pfam	PF03171, 2OG-Fe(II) oxygenase superfamily

Metabolic pathway

ETHYL-PWY: ethylene biosynthesis I (plants)

KEGG pathway

PATH:ath00270: Cysteine and methionine metabolism

Transcriptional regulation

Regulator:
AT2G38250

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

14 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	3.39	2.42E-11
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	3.37	3.01E-11
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	3.06	9.13E-11
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.82	6.62E-10
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.50	1.93E-08
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.52	1.79E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-1.64	9.80E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.84	1.10E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.98	3.82E-15
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.05	1.44E-10

Showing 1 to 10 of 14 entries

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