gene detail

Gene description

TAIR ID: AT1G11870

Short description: Seryl-tRNA synthetase

Pathogen responsiveness: -1.54

General responsiveness: -0.94

Orthologous

Rice:

OS11G0610900

Maize:

GRMZM2G169160

Wheat: No orthologous gene

GO biological process

seryl-tRNA aminoacylation, plant ovule development, tRNA aminoacylation, chloroplast organization, mitochondrion organization, selenocysteinyl-tRNA(Sec) biosynthetic process

GO cellular component

chloroplast, cytoplasm, mitochondrion

GO molecular function

serine-tRNA ligase activity, ATP binding

Protein domain

Pfam	PF00587, tRNA synthetase class II core domain (G, H, P, S and T)
Pfam	PF02403, Seryl-tRNA synthetase N-terminal domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00970: Aminoacyl-tRNA biosynthesis

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.60	1.99E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.51	2.32E-02