gene detail

Gene description

TAIR ID: AT1G11180

Short description: Secretory carrier membrane protein (SCAMP) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice:

OS01G0780500

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein transport

GO cellular component

integral component of membrane, plasma membrane, transport vesicle membrane

GO molecular function

transmembrane transporter activity

Protein domain

Pfam	PF04144, SCAMP family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.79	2.08E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.75	1.64E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.53	2.16E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.58	1.21E-13