Gene: AT1G11100
     

Gene description


TAIR ID: AT1G11100

Short description: SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related

Pathogen responsiveness: -0.75

General responsiveness: -0.35

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


nucleus, cytoplasm


GO molecular function


helicase activity, ATP binding, metal ion binding


Protein domain


PfamPF00271, Helicase conserved C-terminal domain
PfamPF00097, Zinc finger, C3HC4 type (RING finger)
PfamPF00176, SNF2 family N-terminal domain
SMARTSM00487, DEXDc
SMARTSM00490, HELICc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 2 h2.262.35E-05
GSE17464Penta, controlPenta, Flg22 2 h1.512.69E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.709.48E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.463.82E-04
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.107.03E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.285.81E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.613.21E-14
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.121.49E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.521.35E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.782.11E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.803.93E-04






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