Gene: AT1G09770
     


Gene description


TAIR ID: AT1G09770

Short description: cell division cycle 5

Pathogen responsiveness: -1.92

General responsiveness: -1.31

Orthologous


Rice:

OS04G0348300  

Maize:

AC203535.4_FGT001  

Wheat: No orthologous gene

GO biological process


defense response to bacterium, mRNA processing, DNA repair, transcription, DNA-templated, cell differentiation, defense response signaling pathway, resistance gene-dependent, regulation of transcription, regulation of transcription from RNA polymerase II promoter, innate immune response, RNA splicing, defense response to fungus, resistance gene-independent, cell cycle


GO cellular component


spliceosomal complex, nucleus, chloroplast


GO molecular function


transcription regulatory region DNA binding, transcription factor activity, sequence-specific DNA binding, protein binding, RNA polymerase II transcription factor activity, RNA polymerase II transcription factor recruiting


Protein domain


PfamPF11831, pre-mRNA splicing factor component
PfamPF13921, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
AT1G62360, AT3G54180, AT2G27250, AT4G16890, AT2G17950, AT1G75820

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h1.692.77E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.751.45E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.711.68E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.864.32E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.842.92E-12






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