gene detail

Gene description

TAIR ID: AT1G07280

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: -0.44

General responsiveness: 2.43

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

unkown

GO molecular function

unkown

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G38250, AT2G02820, AT1G24260, AT5G61850, AT1G14350

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.55	9.95E-08
GSE17464	Laer, control	Laer, Flg22 1 h	-1.84	1.11E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-1.86	8.38E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.61	3.53E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.10	4.74E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.74	9.11E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.80	6.71E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.07	5.99E-06
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.55	5.49E-11
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.09	1.16E-03