gene detail

Gene description

TAIR ID: AT1G06790

Short description: RNA polymerase Rpb7 N-terminal domain-containing protein

Pathogen responsiveness: -2.17

General responsiveness: -3.08

Orthologous

Rice:

OS07G0477000

Maize:

GRMZM2G098764

Wheat: No orthologous gene

GO biological process

RNA metabolic process, RNA splicing, transcription, DNA-templated, transcription initiation from RNA polymerase III promoter

GO cellular component

DNA-directed RNA polymerase III complex, nucleus, chloroplast

GO molecular function

DNA-directed 5'-3' RNA polymerase activity, RNA polymerase III activity

Protein domain

Pfam	PF03876, SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
Pfam	PF08292, RNA polymerase III subunit Rpc25

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00230: Purine metabolism
PATH:ath00240: Pyrimidine metabolism
PATH:ath03020: RNA polymerase

Transcriptional regulation

Regulator:
AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE56094_WT_HRPA- view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-3.10	2.55E-06
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.25	7.82E-05