Gene: AT1G06680
     


Gene description


TAIR ID: AT1G06680

Short description: photosystem II subunit P-1

Pathogen responsiveness: -0.43

General responsiveness: 2.62

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G016677  

Wheat:

TAAFFX.120874.1.S1_X_AT  


GO biological process


photosynthesis, light reaction, defense response to bacterium


GO cellular component


thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast thylakoid lumen, photosystem II oxygen evolving complex, chloroplast photosystem II, thylakoid lumen, apoplast, chloroplast, chloroplast envelope, extrinsic component of membrane, chloroplast thylakoid


GO molecular function


calcium ion binding


Protein domain


PfamPF01789, PsbP

Transcriptional regulation


Regulator:
AT5G13790, AT5G11260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


18 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.352.90E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.862.14E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.635.94E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.981.44E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.311.17E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.101.46E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.801.18E-04
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.684.19E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.791.08E-04
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-3.037.33E-11
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.531.71E-03
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.253.90E-07
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.665.98E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.781.68E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.142.18E-06
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.811.04E-04
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.285.43E-07
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.771.79E-04






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