Gene: AT1G04990
     

Gene description


TAIR ID: AT1G04990

Short description: Zinc finger C-x8-C-x5-C-x3-H type family protein

Pathogen responsiveness: -0.78

General responsiveness: -1.54

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


metal ion binding, nuclease activity, DNA binding


Protein domain


PfamPF00642, Zinc finger C-x8-C-x5-C-x3-H type (and similar)
SMARTSM00356, ZnF_C3H1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G41315

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, PstDC3000 12 h1.709.10E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.422.12E-07
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d1.651.55E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.641.37E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.612.00E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.081.28E-10
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.762.07E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.561.26E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.831.49E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.801.50E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.201.32E-04






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