gene detail

Gene description

TAIR ID: AT1G03457

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein

Pathogen responsiveness: -2.07

General responsiveness: -1.68

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

photoperiodism, flowering, mRNA catabolic process, regulation of transcription, DNA-templated, flower development, transcription, regulation of photoperiodism

GO cellular component

intracellular ribonucleoprotein complex, cytoplasm, nucleus

GO molecular function

DNA binding, mRNA binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.89	1.71E-02