gene detail

Gene description

TAIR ID: AT1G02900

Short description: rapid alkalinization factor 1

Pathogen responsiveness: -0.76

General responsiveness: 2.12

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

negative regulation of cell growth, calcium-mediated signaling, root development, cell-cell signaling

GO cellular component

apoplast, plasmodesma, extracellular region

GO molecular function

signal transducer activity, protein binding

Protein domain

Pfam	PF05498, Rapid ALkalinization Factor (RALF)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

No coexpression gene

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.15	5.58E-03
GSE11807	Col, erf104 ko, water 4 h	Col, erf104 ko, Flg22 4 h	1.97	1.80E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	2.45	3.54E-03
GSE17464	Laer, control	Laer, Flg22 1 h	1.94	1.30E-02
GSE17464	Laer, control	Laer, Flg22 2 h	3.25	4.81E-05
GSE17464	Penta, control	Penta, Flg22 2 h	1.91	1.46E-02
GSE17464	Penta, control	Penta, Flg22 2 h	3.24	4.52E-05
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-1.64	3.64E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.80	4.91E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.67	5.27E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.85	9.65E-03
GSE5615	Col, WT, water 1 h	Col, WT, HrpZ 1 h	1.58	2.89E-04
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.55	5.88E-05