gene detail

Gene description

TAIR ID: AT1G02450

Short description: NIM1-interacting 1

Pathogen responsiveness: 2.00

General responsiveness: 0.15

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

negative regulation of transcription, DNA-templated, defense response to bacterium, regulation of systemic acquired resistance

GO cellular component

nucleus

GO molecular function

protein binding

Protein domain

Pfam	PF15699, NPR1 interacting

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT5G64220, AT2G22300, AT4G16150, AT5G09410, AT2G02820, AT1G24260, AT1G14350

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

51 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.42	6.38E-05
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	2.46	1.00E-05
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	1.90	2.01E-02
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.57	4.78E-02
GSE17464	Laer, control	Laer, Flg22 1 h	3.39	5.45E-06
GSE17464	Laer, control	Laer, Flg22 2 h	3.17	2.83E-05
GSE17464	Penta, control	Penta, PstDC3000 12 h	2.35	1.33E-03
GSE17464	Penta, control	Penta, Flg22 2 h	3.29	9.01E-06
GSE17464	Penta, control	Penta, Flg22 2 h	2.93	7.61E-05
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.14	1.37E-02
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.86	1.49E-03
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.83	3.02E-02
GSE18329	Col, WT, control	Col, WT, Hpa noco2 96 h	1.87	4.70E-10
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	2.19	2.89E-11
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	2.23	2.40E-11
GSE19109	Col, lht1, control	Col, lht1, PstDC3000 48 h	1.63	2.29E-03
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	2.38	5.16E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-2.33	1.54E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-2.32	1.16E-05
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	1.92	6.06E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	2.42	2.05E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	5.06	6.59E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.24	1.22E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	6.06	1.15E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	4.20	7.72E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	6.01	8.07E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	6.63	2.30E-16
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	4.48	2.27E-09
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.53	2.20E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	5.69	2.76E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.35	2.08E-07
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-4.03	1.63E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	1.96	9.10E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.76	2.93E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	2.21	3.65E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	3.54	1.95E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	3.63	2.66E-06
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	2.35	6.72E-03
GSE5520	Col, WT, control 24 h	Col, WT, PsDC3118 Cor- 24 h	4.20	1.24E-06
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.76	2.00E-04
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.69	3.21E-04
GSE5685	Col, WT, control 16 h	Col, WT, Ps ES4326 AvrRpt2 16 h	2.39	3.84E-02
GSE5685	Col, WT, control 24 h	Col, WT, Ps ES4326 24 h	2.67	1.93E-02
GSE5686	Col, WT, control 5 d	Col, WT, G.orontii 5 d	1.91	1.22E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	4.24	1.06E-02
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	1.71	1.00E-02
GSE73351	Ws-4, map65_3, control	Ws-4, map65_3, H.ara Emwa1 3 d	3.21	8.02E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.03	1.81E-02
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	5.23	1.24E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	1.74	4.47E-02
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	5.12	1.62E-04