gene detail

Gene description

TAIR ID: AT1G02220

Short description: NAC domain containing protein 3

Pathogen responsiveness: 0.84

General responsiveness: 2.49

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

multicellular organism development, regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF02365, No apical meristem (NAM) protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

39 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	1.84	7.65E-06
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.67	1.43E-05
GSE17464	Laer, control	Laer, Flg22 2 h	1.99	1.77E-04
GSE17464	Penta, control	Penta, PstDC3000 12 h	-1.54	3.77E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.16	1.76E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	3.87	9.92E-07
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.62	3.31E-05
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.68	2.80E-10
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.87	5.04E-09
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.58	3.71E-04
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	2.08	1.36E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-1.61	1.05E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-2.57	1.11E-07
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	2.32	3.22E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.02	8.93E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.68	2.11E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.45	9.61E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	3.47	5.35E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.40	1.25E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	3.68	1.99E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.65	2.54E-08
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.07	3.93E-10
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.52	1.08E-07
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	3.20	1.57E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	1.53	3.04E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	3.59	1.15E-03
GSE5520	Col, WT, control 24 h	Col, WT, PsDC3118 Cor- 24 h	2.83	2.58E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.72	2.91E-16
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.59	1.02E-06
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.73	2.59E-08
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.95	3.64E-09
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.10	5.83E-11
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	1.58	4.20E-06
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.44	7.17E-14
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	1.58	2.50E-06
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	1.58	4.25E-07
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.84	7.80E-09
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.41	5.93E-04
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	3.82	1.20E-06