Q9H7B4 (SMYD3)

Homo sapiens

P27958 (NA)

Hepatitis C virus genotype 1a (isolate H) (HCV)
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Human protein: SMYD3_HUMAN

UniProtID: Q9H7B4

Gene name(s): SMYD3;ZMYND1;ZNFN3A1

Protein name: Histone-lysine N-methyltransferase SMYD3

Gene ID: 64754

HDF/HRF: NA

Virus protein: POLG_HCVH (HCV-H)

UniProtID: P27958

Gene name(s): NA

Protein name: Genome polyprotein

Gene ID: NA

Viral family: Flaviviridae


InteractionSource databasePubMed IDDetection method
Q9H7B4-P27958PHISTO,biogrid,HPIDB,VirusMentha22810585affinity chromatography technology,tandem affinity purification

Evidence suggesting a protein interaction:

Interolog evidence: yes (score 0.696). Show
DDI evidence: yes (score 0.012). Show
Machine learning evidence: yes (score 0.038).
Combined Score: 0.604


Virally targeted human complex

Complex idComplex nameComplex sizeTarget ratioPudMed IDSourceDetail
2315MANF-SMYD320.50 (1/2)NAhu.MAPView

Differentially expression condition

SeriesControlTreatmentRegulationLog2FCAdj.P.ValData type
GSE30723AMs_control_24hAMs_PR8_24hdown-3.272.57e-03Microarray data
GSE32140-GPL6480mock_for_RSV_2hRSV_infectiondown-2.429.20e-06Microarray data
GSE32140-GPL6947mock_for_influenza_2hinfluenza_infection_2hdown-2.032.72e-02Microarray data
GSE48121PANC-1_cells_controlPANC-1_cells_GLV-1h153_infection_6hdown-1.956.07e-08Microarray data
GSE49840Hu_Mock_pCalu3_24hHu_Anhui01_pCalu3_24hdown-1.842.43e-06Microarray data
GSE59226ControlVirus_infectiondown-3.278.92e-05Microarray data
GSE97949uninfected_0hH7N9_infected_7hdown-1.626.08e-15RNA-Seq data
GSE89008HTBE_H5N1_MOI0_mock_infected_18hHTBE_H5N1_MOI5_infected_18hdown-1.631.43e-07RNA-Seq data

Human tissue specific expression (TPM)

Small intestine: 5.6 Liver: 3.1 Gallbladder: 13.1 Duodenum: 5.2 Rectum: 9.7 Tonsil: 7.0 Stomach: 6.5 Salivary glanda: 2.1 Adipose tissue: 5.9 Lung: 14.5 Lymph node: 8.9 Pancreas: 1.6 Kidney: 10.1 Colon: 7.2 Appendix: 6.7 Smooth musle: 9.9 Breast: 14.0 Parathyroid gland: 11.2 Esophagus: 7.3 Heart muscle: 4.2 Spleen: 7.8 Skeletal muscle: 4.0 Bone marrow: 6.1 Skin: 6.8 Urinary bladder: 10.9 Cervix, uterine: 13.6 Endometrium: 10.9 Ovary: 10.1 Fallopian tube: 17.0 Seminal vesicle: 7.7 Prostate: 11.2 Epididymis: 27.0 Testis: 16.3 Placenta: 7.6 Thyroid gland: 27.0 Cerebral cortex: 19.4 Adrenal gland: 16.3
Expression value is measured by Transcripts Per Million (TPM)
Low tissue specificity
Ensembl ID:ENSG00000185420
Gene description:SET and MYND domain containing 3
Chromosome:1
Position245749342-246507312
Protein class:Cancer-related genes, Enzymes, Predicted intracellular proteins
Evidence:Evidence at protein level
Subcellular location:Nucleoplasm, Cytosol