Q9BYM8 (RBCK1)

Homo sapiens

P27958 (NA)

Hepatitis C virus genotype 1a (isolate H) (HCV)
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Human protein: HOIL1_HUMAN

UniProtID: Q9BYM8

Gene name(s): RBCK1;C20orf18;RNF54;UBCE7IP3;XAP3;XAP4

Protein name: RanBP-type and C3HC4-type zinc finger-containing protein 1

Gene ID: 10616

HDF/HRF: NA

Virus protein: POLG_HCVH (HCV-H)

UniProtID: P27958

Gene name(s): NA

Protein name: Genome polyprotein

Gene ID: NA

Viral family: Flaviviridae


InteractionSource databasePubMed IDDetection method
Q9BYM8-P27958biogrid,HPIDB26577923affinity chromatography technology

Evidence suggesting a protein interaction:

Interolog evidence: none/insignificant.
DDI evidence: none/insignificant.
Machine learning evidence: yes (score 0.087).
Combined Score: 0.049


Virally targeted human complex

Complex idComplex nameComplex sizeTarget ratioPudMed IDSourceDetail
6178LUBAC complex31.00 (3/3)21455180CORUMView
6344TNF-R1-associated signaling complex150.33 (5/15)20005846CORUMView
1142SMAD7-SMURF2 complex90.33 (3/9)NAhu.MAPView
1247SMAD7-SMURF2 complex40.50 (2/4)NAhu.MAPView

Differentially expression condition

SeriesControlTreatmentRegulationLog2FCAdj.P.ValData type
GSE101760control_infectedPR8_NS1_infectedup1.596.66e-03RNA-Seq data
GSE101760mock_infectedPR8_NS1_infectedup1.743.54e-04RNA-Seq data
GSE61141non-asthmatic_Vehiclenon-asthmatic_HRV16up1.595.86e-04RNA-Seq data
GSE15810hMSCs_mock-transducedhMSCs_BV-transducedup1.729.13e-03Microarray data
GSE24238Mock_24hHCMV_24hup1.744.87e-03Microarray data
GSE28166mock_infected_24hVN1203_infected_24hdown-1.611.85e-03Microarray data
GSE32155HTB-3_unifectedHTB-174_infecteddown-1.921.19e-04Microarray data
GSE32155HTB-4_unifectedHTB-174_infecteddown-2.971.47e-04Microarray data
GSE93385K048_mock_infectedK048_ZIKV_infectedup2.109.52e-26RNA-Seq data
GSE59226ControlVirus_infectiondown-1.703.86e-04Microarray data
GSE65574MCL001_mock_0hMCL001_RFP-MERS_0hdown-1.718.41e-03Microarray data
GSE65574MCL001_mock_12hMCL001_d3-5-MERS_12hdown-1.512.41e-04Microarray data
GSE99389CD4+_mock_infected_1dEBOV_infected_1dup1.824.24e-19RNA-Seq data
GSE65699PRE_mockPRE_infection_RKAAup1.745.09e-11Microarray data
GSE66486PBMC_uninfected_controlPBMC_healthy_donor_infected_16hup2.123.05e-04Microarray data
GSE66486PBMC_uninfected_controlPBMC_healthy_donor_infected_8hup1.856.32e-04Microarray data
GSE97672-GPL16791MDM-418_H3N2_MOI0_06hMDM-418_H3N2_MOI2_06hup1.702.75e-11RNA-Seq data
GSE99858PBMC_controlPBMC_RV16_infectionup1.642.57e-11Microarray data

Human tissue specific expression (TPM)

Small intestine: 36.7 Liver: 12.5 Gallbladder: 29.2 Duodenum: 33.0 Rectum: 18.9 Tonsil: 16.9 Stomach: 24.5 Salivary glanda: 18.2 Adipose tissue: 29.2 Lung: 37.3 Lymph node: 29.8 Pancreas: 5.3 Kidney: 15.0 Colon: 26.4 Appendix: 37.1 Smooth musle: 26.7 Breast: 20.5 Parathyroid gland: 35.4 Esophagus: 21.2 Heart muscle: 11.9 Spleen: 51.2 Skeletal muscle: 8.3 Bone marrow: 18.0 Skin: 33.1 Urinary bladder: 22.4 Cervix, uterine: 29.1 Endometrium: 31.6 Ovary: 31.0 Fallopian tube: 37.2 Seminal vesicle: 35.9 Prostate: 36.4 Epididymis: 16.5 Testis: 24.5 Placenta: 30.8 Thyroid gland: 26.5 Cerebral cortex: 28.2 Adrenal gland: 31.8
Expression value is measured by Transcripts Per Million (TPM)
Low tissue specificity
Ensembl ID:ENSG00000125826
Gene description:RANBP2-type and C3HC4-type zinc finger containing 1
Chromosome:20
Position407498-430966
Protein class:Disease related genes, Enzymes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Evidence:Evidence at protein level
Subcellular location: