Human protein: RB6I2_HUMAN
UniProtID: Q8IUD2
Gene name(s): ERC1;ELKS;KIAA1081;RAB6IP2
Protein name: ELKS/Rab6-interacting/CAST family member 1
Gene ID: 23085
HDF/HRF: NA
Virus protein: POLG_HCVH (HCV-H)
UniProtID: P27958
Gene name(s): NA
Protein name: Genome polyprotein
Gene ID: NA
Viral family: Flaviviridae
| Interaction | Source database | PubMed ID | Detection method |
|---|---|---|---|
| Q8IUD2-P27958 | PHISTO | 16033967 | anti bait coimmunoprecipitation |
| Interolog evidence: | none/insignificant. | |
| DDI evidence: | yes (score 0.013). | Show |
| Machine learning evidence: | yes (score 0.181). |
Virally targeted human complex
| Complex id | Complex name | Complex size | Target ratio | PudMed ID | Source | Detail |
|---|---|---|---|---|---|---|
| 2118 | CHUK-ERC1-IKBKB-IKBKG | 4 | 0.50 (2/4) | 15218148 | CORUM | View |
| 3197 | RNF10-CD2AP-ERC2-ERC1 | 4 | 0.50 (2/4) | NA | hu.MAP | View |
Differentially expression condition
| Series | Control | Treatment | Regulation | Log2FC | Adj.P.Val | Data type |
|---|---|---|---|---|---|---|
| GSE28166 | mock_infected_12h | VN1203_infected_12h | down | -1.90 | 9.93e-05 | Microarray data |
| GSE28166 | mock_infected_18h | VN1203_infected_18h | down | -2.65 | 6.27e-04 | Microarray data |
| GSE28166 | mock_infected_24h | VN1203_infected_24h | down | -2.13 | 6.58e-04 | Microarray data |
| GSE32140-GPL6480 | mock_for_RSV_2h | RSV_infection | down | -1.63 | 9.41e-05 | Microarray data |
| GSE32155 | CRL-5800_unifected | CRL-5807_infected | down | -2.38 | 3.99e-05 | Microarray data |
| GSE32155 | CRL-5810_unifected | CRL-5807_infected | down | -1.61 | 3.21e-04 | Microarray data |
| GSE49840 | Hu_Mock_pCalu3_24h | Hu_NL219_pCalu3_24h | down | -3.47 | 1.20e-04 | Microarray data |
| GSE49840 | Hu_Mock_pCalu3_24h | Hu_VN1203_pCalu3_24h | down | -4.34 | 6.81e-05 | Microarray data |
Human tissue specific expression (TPM)
Expression value is measured by Transcripts Per Million (TPM)
Low tissue specificity
| Ensembl ID: | ENSG00000082805 |
| Gene description: | ELKS/RAB6-interacting/CAST family member 1 |
| Chromosome: | 12 |
| Position | 990509-1495933 |
| Protein class: | Cancer-related genes, Disease related genes, Predicted intracellular proteins |
| Evidence: | Evidence at protein level |
| Subcellular location: | Vesicles, Plasma membrane, Cytosol |