Q53F19 (NCBP3)
Homo sapiensP27958-PRO_0000037566 (NA)
Hepatitis C virus genotype 1a (isolate H) (HCV)Human protein: NCBP3_HUMAN
UniProtID: Q53F19
Gene name(s): NCBP3;C17orf85
Protein name: Nuclear cap-binding protein subunit 3
Gene ID: 55421
HDF/HRF: NA
Virus protein: Core protein p21(POLG_HCVH) (HCV-H)
UniProtID: P27958-PRO_0000037566
Gene name(s): NA
Protein name: Genome polyprotein
Gene ID: NA
Viral family: Flaviviridae
| Interaction | Source database | PubMed ID | Detection method |
|---|---|---|---|
| Q53F19-P27958-PRO_0000037566 | HPIDB | 23487458 | protein array |
Virally targeted human complex
| Complex id | Complex name | Complex size | Target ratio | PudMed ID | Source | Detail |
|---|---|---|---|---|---|---|
| 150 | TREX complex | 13 | 0.08 (1/13) | NA | hu.MAP | View |
| 1644 | hTREX84 complex | 6 | 0.17 (1/6) | NA | hu.MAP | View |
| 3367 | hTREX84 complex | 11 | 0.09 (1/11) | NA | hu.MAP | View |
Differentially expression condition
| Series | Control | Treatment | Regulation | Log2FC | Adj.P.Val | Data type |
|---|---|---|---|---|---|---|
| GSE27702 | control_macrophages | H5N1-infected_macrophages | down | -1.90 | 4.92e-03 | Microarray data |
| GSE28166 | mock_infected_18h | VN1203_infected_18h | down | -1.78 | 3.89e-03 | Microarray data |
| GSE49840 | Hu_Mock_pCalu3_24h | Hu_NL219_pCalu3_24h | down | -2.46 | 1.33e-03 | Microarray data |
| GSE49840 | Hu_Mock_pCalu3_24h | Hu_VN1203_pCalu3_24h | down | -4.31 | 1.39e-03 | Microarray data |
| GSE65574 | MCL001_mock_12h | MCL001_d3-5-MERS_12h | up | 1.67 | 3.86e-03 | Microarray data |
| GSE89008 | HTBE_H1N1_MOI0_mock_infected_24h | HTBE_H1N1_MOI5_infected_24h | up | 1.95 | 1.72e-12 | RNA-Seq data |
| GSE89008 | HTBE_H3N2_MOI0_mock_infected_18h | HTBE_H3N2_MOI5_infected_18h | up | 3.70 | 1.53e-51 | RNA-Seq data |
| GSE97672-GPL16791 | MDM-418_H3N2_MOI0_12h | MDM-418_H3N2_MOI2_12h | down | -1.51 | 2.98e-02 | RNA-Seq data |
| GSE97672-GPL16791 | MDM-520_H5N1_MOI0_06h | MDM-520_H5N1_MOI2_06h | down | -1.83 | 2.95e-12 | RNA-Seq data |
| GSE97672-GPL16791 | MDM-520_H5N1_MOI0_12h | MDM-520_H5N1_MOI2_12h | down | -1.73 | 2.49e-11 | RNA-Seq data |
| GSE97672-GPL18573 | MDM-513_H5N1_MOI0_12h | MDM-513_H5N1_MOI2_12h | down | -1.61 | 5.76e-09 | RNA-Seq data |
Human tissue specific expression (TPM)
Expression value is measured by Transcripts Per Million (TPM)
Low tissue specificity
| Ensembl ID: | ENSG00000074356 |
| Gene description: | Nuclear cap binding subunit 3 |
| Chromosome: | 17 |
| Position | 3802165-3846251 |
| Protein class: | Predicted intracellular proteins |
| Evidence: | Evidence at protein level |
| Subcellular location: | Nuclear speckles |