Q13242 (SRSF9)

Homo sapiens

P27958-PRO_0000037566 (NA)

Hepatitis C virus genotype 1a (isolate H) (HCV)
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Human protein: SRSF9_HUMAN

UniProtID: Q13242

Gene name(s): SRSF9;SFRS9;SRP30C

Protein name: Serine/arginine-rich splicing factor 9

Gene ID: 8683

HDF/HRF: NA

Virus protein: Core protein p21(POLG_HCVH) (HCV-H)

UniProtID: P27958-PRO_0000037566

Gene name(s): NA

Protein name: Genome polyprotein

Gene ID: NA

Viral family: Flaviviridae


InteractionSource databasePubMed IDDetection method
Q13242-P27958-PRO_0000037566HPIDB23487458protein array

Evidence suggesting a protein interaction:

Interolog evidence: yes (score 0.907). Show
DDI evidence: none/insignificant.
Machine learning evidence: yes (score 0.771).
Combined Score: 1.000


Virally targeted human complex

Complex idComplex nameComplex sizeTarget ratioPudMed IDSourceDetail
351Spliceosome1430.04 (6/143)12226669CORUMView
6072TRA2B1-SRSF9-SRSF6 complex30.33 (1/3)15695522CORUMView
6073SRSF9-SRSF6 complex20.50 (1/2)15695522CORUMView
1090Spliceosome210.05 (1/21)NAhu.MAPView
2802Spliceosome410.05 (2/41)NAhu.MAPView
4295Spliceosome240.04 (1/24)NAhu.MAPView

Differentially expression condition

SeriesControlTreatmentRegulationLog2FCAdj.P.ValData type
GSE30589Vero_E6_Mock_infected_15hpiVero_E6_SARS-Cov_DeltaE_15hpidown-2.513.17e-06Microarray data
GSE30589Vero_E6_Mock_infected_15hpiVero_E6_SARS-Cov_WT_15hpidown-2.517.28e-07Microarray data

Human tissue specific expression (TPM)

Small intestine: 66.2 Liver: 45.0 Gallbladder: 71.5 Duodenum: 69.1 Rectum: 87.2 Tonsil: 110.2 Stomach: 72.3 Salivary glanda: 29.8 Adipose tissue: 66.7 Lung: 82.0 Lymph node: 106.1 Pancreas: 22.5 Kidney: 88.2 Colon: 83.5 Appendix: 95.6 Smooth musle: 81.5 Breast: 85.3 Parathyroid gland: 120.7 Esophagus: 73.7 Heart muscle: 18.7 Spleen: 97.2 Skeletal muscle: 8.2 Bone marrow: 56.4 Skin: 68.0 Urinary bladder: 71.8 Cervix, uterine: 100.8 Endometrium: 86.9 Ovary: 82.9 Fallopian tube: 115.9 Seminal vesicle: 76.8 Prostate: 116.6 Epididymis: 98.1 Testis: 139.2 Placenta: 115.2 Thyroid gland: 127.1 Cerebral cortex: 73.5 Adrenal gland: 109.5
Expression value is measured by Transcripts Per Million (TPM)
Low tissue specificity
Ensembl ID:ENSG00000111786
Gene description:Serine and arginine rich splicing factor 9
Chromosome:12
Position120461668-120469793
Protein class:Predicted intracellular proteins
Evidence:Evidence at protein level
Subcellular location:Nucleoplasm