Human protein: RL6_HUMAN
UniProtID: Q02878
Gene name(s): RPL6;TXREB1
Protein name: 60S ribosomal protein L6
Gene ID: 6128
HDF/HRF: NA
Virus protein: POLG_HCVH (HCV-H)
UniProtID: P27958
Gene name(s): NA
Protein name: Genome polyprotein
Gene ID: NA
Viral family: Flaviviridae
| Interaction | Source database | PubMed ID | Detection method |
|---|---|---|---|
| Q02878-P27958 | PHISTO | 17229681 | anti tag coimmunoprecipitation |
| Interolog evidence: | none/insignificant. | |
| DDI evidence: | yes (score 0.013). | Show |
| Machine learning evidence: | yes (score 0.214). |
Virally targeted human complex
| Complex id | Complex name | Complex size | Target ratio | PudMed ID | Source | Detail |
|---|---|---|---|---|---|---|
| 3055 | Nop56p-associated pre-rRNA complex | 104 | 0.12 (12/104) | 12777385 | CORUM | View |
| 306 | Ribosome, cytoplasmic | 80 | 0.10 (8/80) | 14681386 | CORUM | View |
| 308 | 60S ribosomal subunit, cytoplasmic | 47 | 0.13 (6/47) | 14681386 | CORUM | View |
| 5232 | TNF-alpha/Nf-kappa B signaling complex (RPL6, RPL30, RPS13, CHUK, DDX3X, NFKB2, NFKBIB, REL, IKBKG, NFKB1, MAP3K8, RELB, GLG1, NFKBIA, RELA, TNIP2, GTF2I) | 17 | 0.18 (3/17) | 14743216 | CORUM | View |
| 5266 | TNF-alpha/NF-kappa B signaling complex 6 | 14 | 0.36 (5/14) | 14743216 | CORUM | View |
| 2146 | Ribosome, cytoplasmic | 143 | 0.13 (18/143) | NA | hu.MAP | View |
| 2985 | Ribosome, cytoplasmic | 139 | 0.12 (16/139) | NA | hu.MAP | View |
Differentially expression condition
| Series | Control | Treatment | Regulation | Log2FC | Adj.P.Val | Data type |
|---|---|---|---|---|---|---|
| GSE30589 | Vero_E6_Mock_infected_15hpi | Vero_E6_SARS-Cov_DeltaE_15hpi | down | -2.36 | 3.27e-07 | Microarray data |
| GSE30589 | Vero_E6_Mock_infected_15hpi | Vero_E6_SARS-Cov_WT_15hpi | down | -2.42 | 1.50e-06 | Microarray data |
| GSE65574 | MCL001_mock_0h | MCL001_RFP-MERS_0h | down | -1.82 | 1.93e-02 | Microarray data |
| GSE65574 | MCL001_mock_12h | MCL001_d4B-MERS_12h | down | -2.66 | 4.35e-05 | Microarray data |
| GSE65574 | MCL001_mock_7h | MCL001_RFP-MERS_7h | down | -2.10 | 1.76e-03 | Microarray data |
Human tissue specific expression (TPM)
Expression value is measured by Transcripts Per Million (TPM)
Low tissue specificity
| Ensembl ID: | ENSG00000089009 |
| Gene description: | Ribosomal protein L6 |
| Chromosome: | 12 |
| Position | 112405190-112418838 |
| Protein class: | Predicted intracellular proteins, Ribosomal proteins |
| Evidence: | Evidence at protein level |
| Subcellular location: | Microtubules, Cytokinetic bridge |