Human protein: ACTN1_HUMAN
UniProtID: P12814
Gene name(s): ACTN1
Protein name: Alpha-actinin-1
Gene ID: 87
HDF/HRF: NA
Virus protein: POLG_HCVH (HCV-H)
UniProtID: P27958
Gene name(s): NA
Protein name: Genome polyprotein
Gene ID: NA
Viral family: Flaviviridae
| Interaction | Source database | PubMed ID | Detection method |
|---|---|---|---|
| P12814-P27958 | PHISTO,biogrid,HPIDB | 18985028,14623081 | anti tag coimmunoprecipitation,two hybrid |
| Interolog evidence: | none/insignificant. | |
| DDI evidence: | yes (score 0.003). | Show |
| Machine learning evidence: | yes (score 0.459). |
Virally targeted human complex
| Complex id | Complex name | Complex size | Target ratio | PudMed ID | Source | Detail |
|---|---|---|---|---|---|---|
| 4025 | ACTN1-PARVB complex | 2 | 0.50 (1/2) | 15159419 | CORUM | View |
| 5177 | Polycystin-1 multiprotein complex (ACTN1, CDH1, SRC, JUP, VCL, CTNNB1, PXN, BCAR1, PKD1, PTK2, TLN1) | 11 | 0.18 (2/11) | 11113628 | CORUM | View |
| 780 | CART complex | 48 | 0.12 (6/48) | NA | hu.MAP | View |
| 2122 | SLC9A3R1-ACTN4 complex | 6 | 0.17 (1/6) | NA | hu.MAP | View |
| 2322 | Affixin-actinin(alpha) complex | 4 | 0.25 (1/4) | NA | hu.MAP | View |
Differentially expression condition
| Series | Control | Treatment | Regulation | Log2FC | Adj.P.Val | Data type |
|---|---|---|---|---|---|---|
| GSE27702 | control_macrophages | FPV-infected_macrophages | down | -1.93 | 4.45e-02 | Microarray data |
| GSE32155 | HTB-3_unifected | HTB-174_infected | down | -2.37 | 1.10e-04 | Microarray data |
| GSE49840 | Hu_Mock_pCalu3_24h | Hu_Anhui01_pCalu3_24h | down | -1.78 | 8.68e-08 | Microarray data |
| GSE59226 | Control | Virus_infection | down | -1.63 | 2.50e-04 | Microarray data |
| GSE65574 | MCL001_mock_0h | MCL001_RFP-MERS_0h | down | -2.98 | 8.43e-03 | Microarray data |
| GSE65574 | MCL001_mock_12h | MCL001_d3-5-MERS_12h | down | -4.23 | 1.98e-04 | Microarray data |
| GSE65574 | MCL001_mock_12h | MCL001_d4B-MERS_12h | down | -6.05 | 3.55e-05 | Microarray data |
| GSE65574 | MCL001_mock_12h | MCL001_RFP-MERS_12h | down | -4.21 | 1.05e-03 | Microarray data |
| GSE65574 | MCL001_mock_7h | MCL001_RFP-MERS_7h | down | -3.32 | 5.73e-03 | Microarray data |
| GSE99298 | mock_infected_0h | hRSV_NS1_Y125A_infected_96h | up | 1.78 | 9.87e-05 | RNA-Seq data |
| GSE89008 | HTBE_H5N1_MOI0_mock_infected_12h | HTBE_H5N1_MOI5_infected_12h | down | -2.33 | 2.78e-27 | RNA-Seq data |
| GSE89008 | HTBE_H5N1_MOI0_mock_infected_18h | HTBE_H5N1_MOI5_infected_18h | down | -3.08 | 4.80e-75 | RNA-Seq data |
| GSE97672-GPL16791 | MDM-418_H3N2_MOI0_12h | MDM-418_H3N2_MOI2_12h | down | -1.79 | 9.75e-04 | RNA-Seq data |
| GSE97672-GPL16791 | MDM-418_H3N2_MOI0_18h | MDM-418_H3N2_MOI2_18h | down | -1.82 | 1.91e-23 | RNA-Seq data |
| GSE97672-GPL16791 | MDM-520_H5N1_MOI0_12h | MDM-520_H5N1_MOI2_12h | down | -2.26 | 5.55e-39 | RNA-Seq data |
| GSE97672-GPL16791 | MDM-520_H5N1_MOI0_18h | MDM-520_H5N1_MOI2_18h | down | -2.73 | 3.29e-67 | RNA-Seq data |
| GSE97672-GPL18573 | MDM-513_H5N1_MOI0_18h | MDM-513_H5N1_MOI2_18h | down | -2.78 | 3.34e-96 | RNA-Seq data |
| GSE97672-GPL18573 | MDM-513_H5N1_MOI0_12h | MDM-513_H5N1_MOI2_12h | down | -1.56 | 3.71e-27 | RNA-Seq data |
Human tissue specific expression (TPM)
Expression value is measured by Transcripts Per Million (TPM)
Low tissue specificity
| Ensembl ID: | ENSG00000072110 |
| Gene description: | Actinin alpha 1 |
| Chromosome: | 14 |
| Position | 68874143-68979440 |
| Protein class: | Disease related genes, Plasma proteins, Predicted intracellular proteins |
| Evidence: | Evidence at protein level |
| Subcellular location: | Plasma membrane, Focal adhesion sites |