gene detail

Gene description

RAP-DB: OS12G0632700

Short description: Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37).

Orthologous

Arabidopsis:

AT5G09660

Maize: No orthologous

Wheat:

TA.14554.2.S1_X_AT

GO biological process

carbohydrate metabolic process (GO:0005975), malate metabolic process (GO:0006108), cellular carbohydrate metabolic process (GO:0044262), oxidation-reduction process (GO:0055114)

GO cellular component

unknown

GO molecular function

nucleotide binding (GO:0000166), catalytic activity (GO:0003824), oxidoreductase activity (GO:0016491), malate dehydrogenase activity (GO:0016615), oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), L-malate dehydrogenase activity (GO:0030060)

Protein domain

Pfam	PF02866, lactate/malate dehydrogenase, alpha/beta C-terminal domain
Pfam	PF00056, lactate/malate dehydrogenase, NAD binding domain

Metabolic pathway

MALATE-ASPARTATE-SHUTTLE-PWY: aspartate degradation II
GLUCONEO-PWY: gluconeogenesis I
GLYOXYLATE-BYPASS: glyoxylate cycle
PWY-5690: TCA cycle II (plants and fungi)
PWY-5464: superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle

KEGG pathway

PATH:dosa01200: Carbon metabolism
PATH:dosa00020: Citrate cycle (TCA cycle)
PATH:dosa00620: Pyruvate metabolism
PATH:dosa00630: Glyoxylate and dicarboxylate metabolism
PATH:dosa00710: Carbon fixation in photosynthetic organisms
PATH:dosa00270: Cysteine and methionine metabolism

Coexpression network

GSE63047_T7174R  view
GSE62893_S_15B  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	2.16	1.31E-02
GSE62893	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	2.21	1.30E-02
GSE62894	Nipponbare, Pish, water 2 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 2 d	2.03	1.84E-03
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	1.91	3.32E-03
GSE62894	Nipponbare, Pish, water 5 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 5 d	2.66	8.33E-05
GSE62894	Nipponbare, pish, water 2 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 2 d	1.69	1.92E-02
GSE62894	Nipponbare, pish, water 3 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 3 d	1.53	1.72E-02
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-1.80	5.63E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-1.64	3.09E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-2.21	4.41E-04
GSE63337	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 0 h	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 72 h	1.55	1.31E-05