gene detail

Gene description

RAP-DB: OS12G0605800

Short description: Similar to 3-methylcrotonyl CoA carboxylase biotin-containing subunit (Fragment).

Orthologous

Arabidopsis:

AT1G03090

Maize:

GRMZM2G019926

Wheat:

TA.15150.1.S1_AT TA.15150.1.S1_X_AT

GO biological process

metabolic process (GO:0008152)

GO cellular component

unknown

GO molecular function

catalytic activity (GO:0003824), biotin carboxylase activity (GO:0004075), ATP binding (GO:0005524), ligase activity (GO:0016874), metal ion binding (GO:0046872)

Protein domain

Pfam	PF02785, Biotin carboxylase C-terminal domain
Pfam	PF00364, Biotin-requiring enzyme
Pfam	PF00289, Biotin carboxylase, N-terminal domain
Pfam	PF02786, Carbamoyl-phosphate synthase L chain, ATP binding domain
SMART	SM00878, Biotin_carb_C

Metabolic pathway

LEU-DEG2-PWY: leucine degradation I

KEGG pathway

PATH:dosa00280: Valine, leucine and isoleucine degradation

Coexpression network

GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE62894_S_77  view
GSE33411_IRBB7  view
GSE62893_S_15B  view
GSE62893_R_15B  view
GSE62895_R_15B_ROOT  view
GSE62894_R_77  view
GSE63047_DELTAHRCV  view
GSE33411_IR24  view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	1.71	1.23E-11
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	1.55	1.15E-10
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	1.56	8.42E-11
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99A_2	-1.53	1.49E-07
GSE62894	Nipponbare, Pish, water 3 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 3 d	1.78	4.65E-02
GSE62894	Nipponbare, Pish, water 5 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 5 d	2.18	1.59E-02
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.21	3.88E-03
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-2.45	5.08E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-1.78	4.37E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-2.33	6.75E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-2.43	6.96E-03